Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23145 and PS417_23150 are separated by 2 nucleotides PS417_23150 and PS417_23155 overlap by 1 nucleotides PS417_23155 and PS417_23160 are separated by 12 nucleotides
PS417_23145: PS417_23145 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, at 5,017,405 to 5,018,514
_23145
PS417_23150: PS417_23150 - Cro/Cl family transcriptional regulator, at 5,018,517 to 5,019,500
_23150
PS417_23155: PS417_23155 - pilus assembly protein PilW, at 5,019,500 to 5,020,258
_23155
PS417_23160: PS417_23160 - 50S rRNA methyltransferase, at 5,020,271 to 5,021,419
_23160
Position (kb) 5018
5019
5020 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5018.588 kb on - strand at 5018.658 kb on - strand, within PS417_23150 at 5018.658 kb on - strand, within PS417_23150 at 5018.746 kb on - strand, within PS417_23150 at 5018.793 kb on - strand, within PS417_23150 at 5019.517 kb on - strand at 5019.624 kb on - strand, within PS417_23155 at 5019.624 kb on - strand, within PS417_23155 at 5019.624 kb on - strand, within PS417_23155 at 5019.624 kb on - strand, within PS417_23155 at 5019.624 kb on - strand, within PS417_23155 at 5019.629 kb on - strand, within PS417_23155 at 5019.629 kb on - strand, within PS417_23155 at 5019.629 kb on - strand, within PS417_23155 at 5019.667 kb on - strand, within PS417_23155 at 5019.667 kb on - strand, within PS417_23155 at 5019.667 kb on - strand at 5019.670 kb on - strand, within PS417_23155 at 5019.670 kb on - strand, within PS417_23155 at 5019.688 kb on - strand, within PS417_23155 at 5019.688 kb on - strand, within PS417_23155 at 5019.688 kb on - strand, within PS417_23155 at 5019.982 kb on - strand, within PS417_23155 at 5019.982 kb on - strand, within PS417_23155 at 5020.141 kb on - strand, within PS417_23155 at 5020.141 kb on - strand, within PS417_23155 at 5020.259 kb on - strand at 5020.334 kb on - strand at 5020.336 kb on - strand at 5020.336 kb on - strand at 5020.435 kb on - strand, within PS417_23160
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 5,018,588 - +0.6 5,018,658 - PS417_23150 0.14 +1.0 5,018,658 - PS417_23150 0.14 +0.8 5,018,746 - PS417_23150 0.23 +1.3 5,018,793 - PS417_23150 0.28 +0.7 5,019,517 - -1.5 5,019,624 - PS417_23155 0.16 +0.4 5,019,624 - PS417_23155 0.16 -1.0 5,019,624 - PS417_23155 0.16 -0.0 5,019,624 - PS417_23155 0.16 -1.3 5,019,624 - PS417_23155 0.16 -0.9 5,019,629 - PS417_23155 0.17 -0.2 5,019,629 - PS417_23155 0.17 -3.4 5,019,629 - PS417_23155 0.17 -1.1 5,019,667 - PS417_23155 0.22 -1.1 5,019,667 - PS417_23155 0.22 -1.0 5,019,667 - +2.3 5,019,670 - PS417_23155 0.22 -0.6 5,019,670 - PS417_23155 0.22 -1.1 5,019,688 - PS417_23155 0.25 -0.8 5,019,688 - PS417_23155 0.25 -1.4 5,019,688 - PS417_23155 0.25 +0.3 5,019,982 - PS417_23155 0.64 +1.0 5,019,982 - PS417_23155 0.64 +0.4 5,020,141 - PS417_23155 0.84 -0.8 5,020,141 - PS417_23155 0.84 +0.4 5,020,259 - +0.7 5,020,334 - -1.3 5,020,336 - -0.4 5,020,336 - -1.3 5,020,435 - PS417_23160 0.14 +2.3
Or see this region's nucleotide sequence