Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17765 and PS417_17770 overlap by 11 nucleotides PS417_17770 and PS417_17775 are separated by 1 nucleotides PS417_17775 and PS417_17780 are separated by 276 nucleotides
PS417_17765: PS417_17765 - iron ABC transporter permease, at 3,877,289 to 3,878,350
_17765
PS417_17770: PS417_17770 - ABC transporter permease, at 3,878,340 to 3,880,802
_17770
PS417_17775: PS417_17775 - ABC transporter ATP-binding protein, at 3,880,804 to 3,881,472
_17775
PS417_17780: PS417_17780 - Ais protein, at 3,881,749 to 3,882,423
_17780
Position (kb)
3878
3879
3880
3881 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3877.357 kb on + strand at 3877.701 kb on + strand, within PS417_17765 at 3877.755 kb on + strand, within PS417_17765 at 3877.761 kb on + strand, within PS417_17765 at 3877.761 kb on + strand, within PS417_17765 at 3877.762 kb on - strand, within PS417_17765 at 3877.762 kb on - strand, within PS417_17765 at 3878.007 kb on + strand, within PS417_17765 at 3878.007 kb on + strand at 3878.163 kb on + strand, within PS417_17765 at 3878.163 kb on + strand, within PS417_17765 at 3878.164 kb on - strand, within PS417_17765 at 3878.341 kb on + strand at 3878.341 kb on + strand at 3878.341 kb on + strand at 3878.807 kb on + strand, within PS417_17770 at 3878.945 kb on + strand, within PS417_17770 at 3878.946 kb on - strand, within PS417_17770 at 3878.974 kb on + strand, within PS417_17770 at 3879.024 kb on + strand, within PS417_17770 at 3879.024 kb on + strand, within PS417_17770 at 3879.113 kb on + strand, within PS417_17770 at 3880.044 kb on - strand, within PS417_17770 at 3880.047 kb on + strand, within PS417_17770 at 3880.121 kb on + strand, within PS417_17770 at 3880.122 kb on - strand, within PS417_17770 at 3880.261 kb on - strand, within PS417_17770 at 3880.380 kb on - strand, within PS417_17770 at 3880.655 kb on - strand at 3880.655 kb on - strand at 3880.658 kb on + strand at 3880.658 kb on + strand at 3880.716 kb on + strand at 3881.441 kb on + strand at 3881.441 kb on + strand at 3881.442 kb on - strand at 3881.701 kb on + strand at 3881.702 kb on - strand at 3881.720 kb on + strand at 3881.724 kb on + strand at 3881.724 kb on + strand at 3881.725 kb on - strand at 3881.725 kb on - strand at 3881.727 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 3,877,357 + -0.1 3,877,701 + PS417_17765 0.39 -0.0 3,877,755 + PS417_17765 0.44 -0.2 3,877,761 + PS417_17765 0.44 -0.0 3,877,761 + PS417_17765 0.44 +0.2 3,877,762 - PS417_17765 0.45 +1.2 3,877,762 - PS417_17765 0.45 -0.6 3,878,007 + PS417_17765 0.68 -0.4 3,878,007 + +1.5 3,878,163 + PS417_17765 0.82 +0.2 3,878,163 + PS417_17765 0.82 -0.6 3,878,164 - PS417_17765 0.82 -0.6 3,878,341 + +0.5 3,878,341 + -0.7 3,878,341 + +0.4 3,878,807 + PS417_17770 0.19 +0.0 3,878,945 + PS417_17770 0.25 -0.4 3,878,946 - PS417_17770 0.25 -0.5 3,878,974 + PS417_17770 0.26 +0.1 3,879,024 + PS417_17770 0.28 -1.0 3,879,024 + PS417_17770 0.28 -0.4 3,879,113 + PS417_17770 0.31 +0.7 3,880,044 - PS417_17770 0.69 +2.0 3,880,047 + PS417_17770 0.69 +0.6 3,880,121 + PS417_17770 0.72 -0.5 3,880,122 - PS417_17770 0.72 +0.7 3,880,261 - PS417_17770 0.78 -1.6 3,880,380 - PS417_17770 0.83 -0.8 3,880,655 - -1.3 3,880,655 - -0.3 3,880,658 + -0.8 3,880,658 + +0.4 3,880,716 + -0.0 3,881,441 + -1.6 3,881,441 + +0.0 3,881,442 - +0.5 3,881,701 + -2.1 3,881,702 - -1.1 3,881,720 + -0.7 3,881,724 + -1.2 3,881,724 + -2.1 3,881,725 - +0.9 3,881,725 - +0.2 3,881,727 + -1.1
Or see this region's nucleotide sequence