Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16920 and PS417_16925 overlap by 4 nucleotides PS417_16925 and PS417_16930 are separated by 169 nucleotides
PS417_16920: PS417_16920 - multidrug RND transporter, at 3,688,588 to 3,690,039
_16920
PS417_16925: PS417_16925 - MarR family transcriptional regulator, at 3,690,036 to 3,690,509
_16925
PS417_16930: PS417_16930 - histidine kinase, at 3,690,679 to 3,693,465
_16930
Position (kb)
3690
3691 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3689.495 kb on + strand, within PS417_16920 at 3689.496 kb on - strand, within PS417_16920 at 3689.618 kb on + strand, within PS417_16920 at 3689.756 kb on + strand, within PS417_16920 at 3689.978 kb on + strand at 3689.979 kb on - strand at 3690.023 kb on - strand at 3690.023 kb on - strand at 3690.522 kb on + strand at 3690.545 kb on + strand at 3690.546 kb on - strand at 3690.590 kb on - strand at 3690.592 kb on + strand at 3690.631 kb on - strand at 3690.631 kb on - strand at 3690.667 kb on + strand at 3690.668 kb on - strand at 3690.686 kb on + strand at 3690.717 kb on - strand at 3690.717 kb on - strand at 3690.768 kb on - strand at 3690.796 kb on + strand at 3690.847 kb on + strand at 3690.848 kb on - strand at 3691.070 kb on - strand, within PS417_16930 at 3691.070 kb on - strand, within PS417_16930 at 3691.070 kb on - strand, within PS417_16930 at 3691.102 kb on + strand at 3691.228 kb on + strand at 3691.228 kb on + strand, within PS417_16930 at 3691.228 kb on + strand, within PS417_16930 at 3691.228 kb on + strand, within PS417_16930 at 3691.228 kb on + strand, within PS417_16930 at 3691.228 kb on + strand, within PS417_16930 at 3691.229 kb on - strand, within PS417_16930 at 3691.229 kb on - strand, within PS417_16930 at 3691.359 kb on + strand, within PS417_16930 at 3691.360 kb on - strand, within PS417_16930 at 3691.384 kb on - strand, within PS417_16930 at 3691.384 kb on - strand, within PS417_16930
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 3,689,495 + PS417_16920 0.62 +1.1 3,689,496 - PS417_16920 0.63 -0.7 3,689,618 + PS417_16920 0.71 -1.3 3,689,756 + PS417_16920 0.80 +0.7 3,689,978 + -0.3 3,689,979 - -0.2 3,690,023 - -0.2 3,690,023 - +1.3 3,690,522 + -0.7 3,690,545 + +0.4 3,690,546 - +0.6 3,690,590 - -0.0 3,690,592 + +0.1 3,690,631 - -0.2 3,690,631 - -0.2 3,690,667 + -1.3 3,690,668 - -0.0 3,690,686 + +1.7 3,690,717 - -1.2 3,690,717 - -2.1 3,690,768 - +0.1 3,690,796 + +2.3 3,690,847 + +0.5 3,690,848 - -0.1 3,691,070 - PS417_16930 0.14 -0.9 3,691,070 - PS417_16930 0.14 +0.4 3,691,070 - PS417_16930 0.14 -0.6 3,691,102 + +1.0 3,691,228 + +2.0 3,691,228 + PS417_16930 0.20 +0.4 3,691,228 + PS417_16930 0.20 -0.5 3,691,228 + PS417_16930 0.20 -0.3 3,691,228 + PS417_16930 0.20 -0.0 3,691,228 + PS417_16930 0.20 -0.6 3,691,229 - PS417_16930 0.20 -0.2 3,691,229 - PS417_16930 0.20 -0.3 3,691,359 + PS417_16930 0.24 +0.1 3,691,360 - PS417_16930 0.24 -1.2 3,691,384 - PS417_16930 0.25 +0.6 3,691,384 - PS417_16930 0.25 -0.7
Or see this region's nucleotide sequence