Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07480 and PS417_07485 are separated by 117 nucleotides PS417_07485 and PS417_07490 are separated by 41 nucleotides
PS417_07480: PS417_07480 - allophanate hydrolase, at 1,644,180 to 1,645,088
_07480
PS417_07485: PS417_07485 - hypothetical protein, at 1,645,206 to 1,645,745
_07485
PS417_07490: PS417_07490 - von Willebrand factor A, at 1,645,787 to 1,646,965
_07490
Position (kb)
1645
1646 Strain fitness (log2 ratio)
-1
0
1 at 1645.147 kb on - strand at 1645.213 kb on - strand at 1645.224 kb on + strand at 1645.224 kb on + strand at 1645.225 kb on - strand at 1645.225 kb on - strand at 1645.225 kb on - strand at 1645.252 kb on + strand at 1645.252 kb on + strand at 1645.480 kb on - strand, within PS417_07485 at 1645.480 kb on - strand, within PS417_07485 at 1645.489 kb on + strand, within PS417_07485 at 1645.511 kb on + strand, within PS417_07485 at 1645.577 kb on + strand, within PS417_07485 at 1645.577 kb on + strand, within PS417_07485 at 1645.578 kb on - strand, within PS417_07485 at 1645.578 kb on - strand, within PS417_07485 at 1645.578 kb on - strand, within PS417_07485 at 1645.578 kb on - strand, within PS417_07485 at 1645.578 kb on - strand, within PS417_07485 at 1645.578 kb on - strand, within PS417_07485 at 1645.599 kb on + strand, within PS417_07485 at 1645.599 kb on + strand, within PS417_07485 at 1645.600 kb on - strand, within PS417_07485 at 1645.600 kb on - strand, within PS417_07485 at 1645.840 kb on - strand at 1645.885 kb on + strand at 1645.885 kb on + strand at 1645.885 kb on + strand at 1645.886 kb on - strand at 1645.888 kb on - strand at 1645.935 kb on + strand, within PS417_07490 at 1645.935 kb on + strand, within PS417_07490 at 1645.935 kb on + strand, within PS417_07490 at 1645.935 kb on + strand, within PS417_07490 at 1645.935 kb on + strand, within PS417_07490 at 1645.965 kb on + strand, within PS417_07490 at 1645.965 kb on + strand, within PS417_07490 at 1645.965 kb on + strand, within PS417_07490 at 1645.965 kb on + strand, within PS417_07490 at 1645.965 kb on + strand, within PS417_07490 at 1646.070 kb on + strand, within PS417_07490 at 1646.071 kb on - strand, within PS417_07490 at 1646.071 kb on - strand, within PS417_07490 at 1646.071 kb on - strand, within PS417_07490 at 1646.142 kb on + strand, within PS417_07490 at 1646.161 kb on - strand, within PS417_07490 at 1646.166 kb on + strand, within PS417_07490 at 1646.167 kb on - strand, within PS417_07490 at 1646.302 kb on + strand, within PS417_07490 at 1646.302 kb on + strand, within PS417_07490 at 1646.455 kb on - strand, within PS417_07490
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 1,645,147 - +0.9 1,645,213 - +1.4 1,645,224 + -0.3 1,645,224 + +1.7 1,645,225 - +0.3 1,645,225 - +0.8 1,645,225 - -0.6 1,645,252 + +0.1 1,645,252 + -1.0 1,645,480 - PS417_07485 0.51 -1.2 1,645,480 - PS417_07485 0.51 -0.0 1,645,489 + PS417_07485 0.52 -0.5 1,645,511 + PS417_07485 0.56 -0.3 1,645,577 + PS417_07485 0.69 -1.2 1,645,577 + PS417_07485 0.69 +1.6 1,645,578 - PS417_07485 0.69 +0.2 1,645,578 - PS417_07485 0.69 +1.4 1,645,578 - PS417_07485 0.69 -0.5 1,645,578 - PS417_07485 0.69 +1.6 1,645,578 - PS417_07485 0.69 -0.2 1,645,578 - PS417_07485 0.69 -0.3 1,645,599 + PS417_07485 0.73 +0.7 1,645,599 + PS417_07485 0.73 -0.2 1,645,600 - PS417_07485 0.73 -0.6 1,645,600 - PS417_07485 0.73 -0.1 1,645,840 - +0.3 1,645,885 + +0.5 1,645,885 + -0.6 1,645,885 + +0.7 1,645,886 - -0.1 1,645,888 - -0.5 1,645,935 + PS417_07490 0.13 -0.2 1,645,935 + PS417_07490 0.13 -0.1 1,645,935 + PS417_07490 0.13 +1.6 1,645,935 + PS417_07490 0.13 -0.1 1,645,935 + PS417_07490 0.13 +1.6 1,645,965 + PS417_07490 0.15 +0.1 1,645,965 + PS417_07490 0.15 -0.5 1,645,965 + PS417_07490 0.15 +0.2 1,645,965 + PS417_07490 0.15 -0.2 1,645,965 + PS417_07490 0.15 -0.7 1,646,070 + PS417_07490 0.24 +0.2 1,646,071 - PS417_07490 0.24 +1.0 1,646,071 - PS417_07490 0.24 -1.0 1,646,071 - PS417_07490 0.24 -0.6 1,646,142 + PS417_07490 0.30 -0.6 1,646,161 - PS417_07490 0.32 -0.2 1,646,166 + PS417_07490 0.32 -0.7 1,646,167 - PS417_07490 0.32 -0.4 1,646,302 + PS417_07490 0.44 +0.3 1,646,302 + PS417_07490 0.44 -0.2 1,646,455 - PS417_07490 0.57 -1.7
Or see this region's nucleotide sequence