Experiment: Fraxetin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27450 and PS417_27455 are separated by 116 nucleotides PS417_27455 and PS417_27460 are separated by 47 nucleotides PS417_27460 and PS417_27465 are separated by 1 nucleotides
PS417_27450: PS417_27450 - membrane protein, at 5,924,418 to 5,925,653
_27450
PS417_27455: PS417_27455 - isoprenoid biosynthesis protein, at 5,925,770 to 5,926,435
_27455
PS417_27460: PS417_27460 - hypothetical protein, at 5,926,483 to 5,926,938
_27460
PS417_27465: PS417_27465 - cystathionine gamma-synthase, at 5,926,940 to 5,928,835
_27465
Position (kb)
5926
5927 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5925.542 kb on + strand at 5925.543 kb on - strand at 5925.565 kb on + strand at 5925.604 kb on - strand at 5925.604 kb on - strand at 5925.668 kb on + strand at 5925.668 kb on + strand at 5925.668 kb on + strand at 5925.688 kb on + strand at 5925.688 kb on + strand at 5925.689 kb on - strand at 5925.689 kb on - strand at 5925.731 kb on + strand at 5925.743 kb on - strand at 5925.812 kb on + strand at 5925.812 kb on + strand at 5925.960 kb on + strand, within PS417_27455 at 5925.961 kb on - strand, within PS417_27455 at 5926.177 kb on + strand, within PS417_27455 at 5926.178 kb on - strand, within PS417_27455 at 5926.178 kb on - strand, within PS417_27455 at 5926.205 kb on + strand, within PS417_27455 at 5926.205 kb on + strand, within PS417_27455 at 5926.205 kb on + strand, within PS417_27455 at 5926.206 kb on - strand, within PS417_27455 at 5926.206 kb on - strand, within PS417_27455 at 5926.206 kb on - strand, within PS417_27455 at 5926.346 kb on + strand, within PS417_27455 at 5926.346 kb on + strand, within PS417_27455 at 5926.346 kb on + strand, within PS417_27455 at 5926.347 kb on - strand, within PS417_27455 at 5926.347 kb on - strand, within PS417_27455 at 5926.347 kb on - strand, within PS417_27455 at 5926.347 kb on - strand, within PS417_27455 at 5926.348 kb on + strand, within PS417_27455 at 5926.348 kb on + strand, within PS417_27455 at 5926.503 kb on + strand at 5926.753 kb on + strand, within PS417_27460 at 5926.754 kb on - strand, within PS417_27460 at 5926.760 kb on + strand, within PS417_27460 at 5926.760 kb on + strand, within PS417_27460 at 5926.761 kb on - strand, within PS417_27460 at 5926.761 kb on - strand, within PS417_27460 at 5926.792 kb on + strand, within PS417_27460 at 5926.983 kb on + strand at 5926.983 kb on + strand at 5926.984 kb on - strand at 5926.984 kb on - strand at 5927.032 kb on - strand at 5927.032 kb on - strand at 5927.135 kb on + strand, within PS417_27465 at 5927.136 kb on - strand, within PS417_27465 at 5927.393 kb on + strand, within PS417_27465 at 5927.412 kb on + strand, within PS417_27465 at 5927.412 kb on + strand, within PS417_27465 at 5927.413 kb on - strand, within PS417_27465 at 5927.413 kb on - strand, within PS417_27465 at 5927.413 kb on - strand, within PS417_27465 at 5927.542 kb on - strand, within PS417_27465 at 5927.712 kb on + strand, within PS417_27465 at 5927.712 kb on + strand, within PS417_27465 at 5927.712 kb on + strand, within PS417_27465 at 5927.713 kb on - strand, within PS417_27465 at 5927.713 kb on - strand, within PS417_27465 at 5927.713 kb on - strand, within PS417_27465 at 5927.713 kb on - strand, within PS417_27465 at 5927.925 kb on + strand, within PS417_27465 at 5927.926 kb on - strand, within PS417_27465 at 5927.926 kb on - strand, within PS417_27465
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; solid stress remove 5,925,542 + +0.6 5,925,543 - +1.4 5,925,565 + -0.4 5,925,604 - +1.3 5,925,604 - +0.8 5,925,668 + -0.4 5,925,668 + -1.1 5,925,668 + -0.0 5,925,688 + +0.1 5,925,688 + +0.4 5,925,689 - -0.2 5,925,689 - -0.1 5,925,731 + -0.7 5,925,743 - -0.0 5,925,812 + +1.0 5,925,812 + +0.4 5,925,960 + PS417_27455 0.29 +0.2 5,925,961 - PS417_27455 0.29 -0.2 5,926,177 + PS417_27455 0.61 -0.1 5,926,178 - PS417_27455 0.61 -2.1 5,926,178 - PS417_27455 0.61 +0.6 5,926,205 + PS417_27455 0.65 +1.0 5,926,205 + PS417_27455 0.65 +0.4 5,926,205 + PS417_27455 0.65 -0.3 5,926,206 - PS417_27455 0.65 -0.3 5,926,206 - PS417_27455 0.65 -0.5 5,926,206 - PS417_27455 0.65 -0.1 5,926,346 + PS417_27455 0.86 -0.2 5,926,346 + PS417_27455 0.86 -0.8 5,926,346 + PS417_27455 0.86 -0.8 5,926,347 - PS417_27455 0.87 -0.5 5,926,347 - PS417_27455 0.87 +0.7 5,926,347 - PS417_27455 0.87 +0.4 5,926,347 - PS417_27455 0.87 -0.5 5,926,348 + PS417_27455 0.87 +0.4 5,926,348 + PS417_27455 0.87 +2.2 5,926,503 + +1.2 5,926,753 + PS417_27460 0.59 +0.0 5,926,754 - PS417_27460 0.59 +0.2 5,926,760 + PS417_27460 0.61 -0.6 5,926,760 + PS417_27460 0.61 -0.9 5,926,761 - PS417_27460 0.61 -0.5 5,926,761 - PS417_27460 0.61 -1.7 5,926,792 + PS417_27460 0.68 +0.4 5,926,983 + -0.6 5,926,983 + -0.9 5,926,984 - -0.9 5,926,984 - +0.5 5,927,032 - +0.8 5,927,032 - -0.1 5,927,135 + PS417_27465 0.10 -0.5 5,927,136 - PS417_27465 0.10 -0.7 5,927,393 + PS417_27465 0.24 -0.2 5,927,412 + PS417_27465 0.25 -0.7 5,927,412 + PS417_27465 0.25 -1.0 5,927,413 - PS417_27465 0.25 -0.3 5,927,413 - PS417_27465 0.25 -1.4 5,927,413 - PS417_27465 0.25 -0.1 5,927,542 - PS417_27465 0.32 -0.4 5,927,712 + PS417_27465 0.41 +0.2 5,927,712 + PS417_27465 0.41 +1.2 5,927,712 + PS417_27465 0.41 -0.3 5,927,713 - PS417_27465 0.41 +0.8 5,927,713 - PS417_27465 0.41 -0.4 5,927,713 - PS417_27465 0.41 +0.3 5,927,713 - PS417_27465 0.41 -0.6 5,927,925 + PS417_27465 0.52 -0.7 5,927,926 - PS417_27465 0.52 -0.7 5,927,926 - PS417_27465 0.52 +0.4
Or see this region's nucleotide sequence