Experiment: Scopoletin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13170 and PS417_13175 are separated by 10 nucleotides PS417_13175 and PS417_13180 are separated by 167 nucleotides
PS417_13170: PS417_13170 - multidrug DMT transporter permease, at 2,877,348 to 2,878,550
_13170
PS417_13175: PS417_13175 - iron transporter, at 2,878,561 to 2,879,394
_13175
PS417_13180: PS417_13180 - AraC family transcriptional regulator, at 2,879,562 to 2,880,587
_13180
Position (kb)
2878
2879
2880 Strain fitness (log2 ratio)
-1
0
1 at 2877.637 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.667 kb on - strand, within PS417_13170 at 2877.827 kb on - strand, within PS417_13170 at 2877.971 kb on - strand, within PS417_13170 at 2878.063 kb on + strand, within PS417_13170 at 2878.199 kb on - strand, within PS417_13170 at 2878.450 kb on + strand at 2878.451 kb on - strand at 2878.538 kb on + strand at 2878.634 kb on + strand at 2878.643 kb on + strand at 2878.889 kb on + strand, within PS417_13175 at 2878.890 kb on - strand, within PS417_13175 at 2878.890 kb on - strand, within PS417_13175 at 2879.321 kb on + strand at 2879.413 kb on + strand at 2879.414 kb on - strand at 2879.418 kb on - strand at 2879.418 kb on - strand at 2879.418 kb on - strand at 2879.425 kb on + strand at 2879.609 kb on - strand at 2880.033 kb on - strand, within PS417_13180 at 2880.033 kb on - strand, within PS417_13180 at 2880.225 kb on - strand, within PS417_13180
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 3 mM; solid stress remove 2,877,637 + PS417_13170 0.24 -1.1 2,877,666 + PS417_13170 0.26 -0.3 2,877,666 + PS417_13170 0.26 +0.2 2,877,666 + PS417_13170 0.26 +0.2 2,877,666 + PS417_13170 0.26 -0.8 2,877,667 - PS417_13170 0.27 +0.4 2,877,827 - PS417_13170 0.40 -0.0 2,877,971 - PS417_13170 0.52 -0.6 2,878,063 + PS417_13170 0.59 -0.4 2,878,199 - PS417_13170 0.71 +0.2 2,878,450 + -0.7 2,878,451 - -1.1 2,878,538 + -0.3 2,878,634 + -0.3 2,878,643 + +0.2 2,878,889 + PS417_13175 0.39 -0.9 2,878,890 - PS417_13175 0.39 -0.5 2,878,890 - PS417_13175 0.39 -0.8 2,879,321 + -0.4 2,879,413 + -0.6 2,879,414 - +0.3 2,879,418 - +1.4 2,879,418 - -0.1 2,879,418 - +0.4 2,879,425 + +0.4 2,879,609 - +1.2 2,880,033 - PS417_13180 0.46 -0.6 2,880,033 - PS417_13180 0.46 -0.9 2,880,225 - PS417_13180 0.65 -0.3
Or see this region's nucleotide sequence