Experiment: 80% Methanol 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16665 and PS417_16675 are separated by 304 nucleotides PS417_16675 and PS417_16680 are separated by 41 nucleotides PS417_16680 and PS417_16685 are separated by 46 nucleotides
PS417_16665: PS417_16665 - hypothetical protein, at 3,640,610 to 3,640,810
_16665
PS417_16675: PS417_16675 - hypothetical protein, at 3,641,115 to 3,641,636
_16675
PS417_16680: PS417_16680 - MFS transporter, at 3,641,678 to 3,642,808
_16680
PS417_16685: PS417_16685 - multidrug MFS transporter, at 3,642,855 to 3,644,219
_16685
Position (kb)
3641
3642
3643 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3640.991 kb on + strand at 3640.992 kb on - strand at 3640.992 kb on - strand at 3641.024 kb on - strand at 3641.024 kb on - strand at 3641.027 kb on + strand at 3641.027 kb on + strand at 3641.028 kb on - strand at 3641.033 kb on + strand at 3641.169 kb on - strand, within PS417_16675 at 3641.169 kb on - strand, within PS417_16675 at 3641.169 kb on - strand, within PS417_16675 at 3641.171 kb on + strand, within PS417_16675 at 3641.171 kb on + strand, within PS417_16675 at 3641.172 kb on - strand, within PS417_16675 at 3641.362 kb on - strand, within PS417_16675 at 3641.404 kb on + strand, within PS417_16675 at 3641.404 kb on + strand, within PS417_16675 at 3641.404 kb on + strand at 3641.405 kb on - strand, within PS417_16675 at 3641.405 kb on - strand, within PS417_16675 at 3641.552 kb on + strand, within PS417_16675 at 3641.552 kb on + strand, within PS417_16675 at 3641.649 kb on - strand at 3641.949 kb on + strand, within PS417_16680 at 3641.949 kb on + strand, within PS417_16680 at 3642.600 kb on + strand, within PS417_16680 at 3642.718 kb on - strand at 3642.853 kb on - strand at 3642.886 kb on - strand at 3643.326 kb on - strand, within PS417_16685 at 3643.763 kb on + strand, within PS417_16685 at 3643.763 kb on + strand, within PS417_16685 at 3643.764 kb on - strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.791 kb on - strand, within PS417_16685 at 3643.791 kb on - strand, within PS417_16685 at 3643.792 kb on + strand, within PS417_16685 at 3643.793 kb on - strand, within PS417_16685
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; solid stress remove 3,640,991 + +1.7 3,640,992 - -1.0 3,640,992 - +0.8 3,641,024 - -1.0 3,641,024 - -0.1 3,641,027 + -0.2 3,641,027 + +0.4 3,641,028 - -2.4 3,641,033 + -0.0 3,641,169 - PS417_16675 0.10 -0.4 3,641,169 - PS417_16675 0.10 -0.2 3,641,169 - PS417_16675 0.10 +0.7 3,641,171 + PS417_16675 0.11 +1.1 3,641,171 + PS417_16675 0.11 -0.1 3,641,172 - PS417_16675 0.11 +0.2 3,641,362 - PS417_16675 0.47 -0.1 3,641,404 + PS417_16675 0.55 +0.5 3,641,404 + PS417_16675 0.55 +0.0 3,641,404 + +2.3 3,641,405 - PS417_16675 0.56 -0.2 3,641,405 - PS417_16675 0.56 -0.4 3,641,552 + PS417_16675 0.84 -0.6 3,641,552 + PS417_16675 0.84 +0.9 3,641,649 - +0.4 3,641,949 + PS417_16680 0.24 +0.7 3,641,949 + PS417_16680 0.24 +2.1 3,642,600 + PS417_16680 0.82 +0.0 3,642,718 - -0.6 3,642,853 - -0.3 3,642,886 - +0.0 3,643,326 - PS417_16685 0.35 +0.0 3,643,763 + PS417_16685 0.67 +0.6 3,643,763 + PS417_16685 0.67 +0.1 3,643,764 - PS417_16685 0.67 -0.2 3,643,790 + PS417_16685 0.68 +0.3 3,643,790 + PS417_16685 0.68 -0.3 3,643,790 + PS417_16685 0.68 +1.4 3,643,791 - PS417_16685 0.69 -0.3 3,643,791 - PS417_16685 0.69 -0.1 3,643,792 + PS417_16685 0.69 +0.0 3,643,793 - PS417_16685 0.69 +1.2
Or see this region's nucleotide sequence