Experiment: 80% Methanol 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26340 and PS417_26345 are separated by 161 nucleotides PS417_26345 and PS417_26350 are separated by 180 nucleotides
PS417_26340: PS417_26340 - betaine-aldehyde dehydrogenase, at 5,693,477 to 5,694,949
_26340
PS417_26345: PS417_26345 - choline dehydrogenase, at 5,695,111 to 5,696,814
_26345
PS417_26350: PS417_26350 - peptidase C69, at 5,696,995 to 5,698,437
_26350
Position (kb)
5695
5696
5697 Strain fitness (log2 ratio)
-1
0
1 at 5694.315 kb on - strand, within PS417_26340 at 5694.495 kb on - strand, within PS417_26340 at 5694.508 kb on + strand, within PS417_26340 at 5694.509 kb on - strand, within PS417_26340 at 5694.669 kb on - strand, within PS417_26340 at 5694.788 kb on - strand, within PS417_26340 at 5694.947 kb on + strand at 5694.948 kb on - strand at 5694.948 kb on - strand at 5694.948 kb on - strand at 5694.963 kb on + strand at 5694.963 kb on + strand at 5694.963 kb on + strand at 5694.963 kb on + strand at 5694.970 kb on + strand at 5694.971 kb on - strand at 5694.971 kb on - strand at 5694.971 kb on - strand at 5694.972 kb on + strand at 5694.972 kb on + strand at 5694.973 kb on - strand at 5695.034 kb on - strand at 5695.034 kb on - strand at 5695.034 kb on - strand at 5695.034 kb on - strand at 5695.037 kb on + strand at 5695.037 kb on + strand at 5695.037 kb on + strand at 5695.038 kb on - strand at 5695.038 kb on - strand at 5695.038 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.129 kb on + strand at 5695.129 kb on + strand at 5695.130 kb on - strand at 5695.130 kb on - strand at 5695.244 kb on + strand at 5695.403 kb on - strand, within PS417_26345 at 5695.403 kb on - strand, within PS417_26345 at 5695.614 kb on - strand, within PS417_26345 at 5695.614 kb on - strand, within PS417_26345 at 5695.683 kb on + strand, within PS417_26345 at 5695.877 kb on + strand, within PS417_26345 at 5696.024 kb on - strand, within PS417_26345 at 5696.077 kb on + strand, within PS417_26345 at 5696.228 kb on - strand, within PS417_26345 at 5696.228 kb on - strand, within PS417_26345 at 5696.356 kb on + strand, within PS417_26345 at 5696.356 kb on + strand, within PS417_26345 at 5696.356 kb on + strand, within PS417_26345 at 5696.357 kb on - strand, within PS417_26345 at 5696.357 kb on - strand, within PS417_26345 at 5696.469 kb on + strand, within PS417_26345 at 5696.749 kb on + strand at 5696.749 kb on + strand at 5696.750 kb on - strand at 5696.812 kb on + strand at 5697.074 kb on + strand at 5697.074 kb on + strand at 5697.091 kb on + strand at 5697.319 kb on + strand, within PS417_26350 at 5697.368 kb on - strand, within PS417_26350 at 5697.509 kb on + strand, within PS417_26350 at 5697.509 kb on + strand, within PS417_26350 at 5697.626 kb on + strand, within PS417_26350 at 5697.796 kb on + strand, within PS417_26350
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; solid stress remove 5,694,315 - PS417_26340 0.57 -0.7 5,694,495 - PS417_26340 0.69 -0.3 5,694,508 + PS417_26340 0.70 -1.7 5,694,509 - PS417_26340 0.70 -0.5 5,694,669 - PS417_26340 0.81 -0.3 5,694,788 - PS417_26340 0.89 -0.4 5,694,947 + -1.2 5,694,948 - -0.2 5,694,948 - +0.2 5,694,948 - -0.2 5,694,963 + -0.5 5,694,963 + -0.3 5,694,963 + -0.3 5,694,963 + -0.4 5,694,970 + -0.0 5,694,971 - +0.5 5,694,971 - -0.3 5,694,971 - -0.8 5,694,972 + -0.5 5,694,972 + -0.4 5,694,973 - +0.1 5,695,034 - +0.5 5,695,034 - -0.1 5,695,034 - -0.3 5,695,034 - +0.7 5,695,037 + +0.4 5,695,037 + +0.3 5,695,037 + -0.5 5,695,038 - +0.2 5,695,038 - +0.3 5,695,038 - +0.5 5,695,088 - +0.1 5,695,088 - -0.5 5,695,129 + -0.1 5,695,129 + -0.3 5,695,130 - -0.0 5,695,130 - -0.7 5,695,244 + -0.1 5,695,403 - PS417_26345 0.17 -1.2 5,695,403 - PS417_26345 0.17 -0.5 5,695,614 - PS417_26345 0.30 +0.1 5,695,614 - PS417_26345 0.30 -0.9 5,695,683 + PS417_26345 0.34 +0.0 5,695,877 + PS417_26345 0.45 -0.1 5,696,024 - PS417_26345 0.54 -0.6 5,696,077 + PS417_26345 0.57 +0.1 5,696,228 - PS417_26345 0.66 -1.2 5,696,228 - PS417_26345 0.66 -1.4 5,696,356 + PS417_26345 0.73 -0.1 5,696,356 + PS417_26345 0.73 -0.3 5,696,356 + PS417_26345 0.73 +0.5 5,696,357 - PS417_26345 0.73 -0.6 5,696,357 - PS417_26345 0.73 -0.5 5,696,469 + PS417_26345 0.80 -1.5 5,696,749 + -0.2 5,696,749 + -0.7 5,696,750 - -0.7 5,696,812 + +0.1 5,697,074 + +0.2 5,697,074 + -0.5 5,697,091 + -0.1 5,697,319 + PS417_26350 0.22 +0.6 5,697,368 - PS417_26350 0.26 +0.2 5,697,509 + PS417_26350 0.36 -0.5 5,697,509 + PS417_26350 0.36 +0.2 5,697,626 + PS417_26350 0.44 -0.0 5,697,796 + PS417_26350 0.56 +0.0
Or see this region's nucleotide sequence