Experiment: 80% Methanol 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23370 and PS417_23375 are separated by 11 nucleotides PS417_23375 and PS417_23380 overlap by 1 nucleotides PS417_23380 and PS417_23385 are separated by 3 nucleotides PS417_23385 and PS417_23390 are separated by 3 nucleotides
PS417_23370: PS417_23370 - protoheme IX farnesyltransferase, at 5,059,146 to 5,060,033
_23370
PS417_23375: PS417_23375 - cytochrome C oxidase, at 5,060,045 to 5,060,386
_23375
PS417_23380: PS417_23380 - cytochrome o ubiquinol oxidase subunit III, at 5,060,386 to 5,061,012
_23380
PS417_23385: PS417_23385 - cytochrome o ubiquinol oxidase subunit I, at 5,061,016 to 5,063,034
_23385
PS417_23390: PS417_23390 - ubiquinol oxidase subunit II, at 5,063,038 to 5,063,979
_23390
Position (kb) 5061
5062
5063
5064 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5060.065 kb on + strand at 5060.184 kb on + strand, within PS417_23375 at 5060.263 kb on - strand, within PS417_23375 at 5060.516 kb on + strand, within PS417_23380 at 5060.516 kb on + strand, within PS417_23380 at 5060.517 kb on - strand, within PS417_23380 at 5060.730 kb on - strand, within PS417_23380 at 5060.861 kb on + strand, within PS417_23380 at 5060.906 kb on + strand, within PS417_23380 at 5061.002 kb on - strand at 5061.485 kb on + strand, within PS417_23385 at 5061.579 kb on + strand, within PS417_23385 at 5061.620 kb on + strand, within PS417_23385 at 5061.720 kb on - strand, within PS417_23385 at 5061.924 kb on - strand, within PS417_23385 at 5061.924 kb on - strand, within PS417_23385 at 5062.082 kb on + strand, within PS417_23385 at 5062.082 kb on + strand, within PS417_23385 at 5062.173 kb on - strand, within PS417_23385 at 5062.173 kb on - strand, within PS417_23385 at 5062.211 kb on + strand, within PS417_23385 at 5062.212 kb on - strand, within PS417_23385 at 5062.212 kb on - strand, within PS417_23385 at 5062.447 kb on + strand, within PS417_23385 at 5062.447 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.853 kb on + strand at 5062.853 kb on + strand at 5062.854 kb on - strand at 5062.854 kb on - strand at 5062.908 kb on - strand at 5062.925 kb on + strand at 5063.144 kb on + strand, within PS417_23390 at 5063.145 kb on - strand, within PS417_23390 at 5063.429 kb on + strand, within PS417_23390 at 5063.430 kb on - strand, within PS417_23390 at 5063.496 kb on + strand, within PS417_23390 at 5063.656 kb on - strand, within PS417_23390 at 5063.656 kb on - strand, within PS417_23390 at 5063.657 kb on + strand, within PS417_23390 at 5063.658 kb on - strand, within PS417_23390 at 5063.666 kb on + strand, within PS417_23390 at 5063.666 kb on + strand, within PS417_23390 at 5063.667 kb on - strand, within PS417_23390 at 5063.747 kb on + strand, within PS417_23390 at 5063.748 kb on - strand, within PS417_23390 at 5063.951 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; solid stress remove 5,060,065 + +1.2 5,060,184 + PS417_23375 0.41 -1.0 5,060,263 - PS417_23375 0.64 +0.2 5,060,516 + PS417_23380 0.21 +1.4 5,060,516 + PS417_23380 0.21 -1.2 5,060,517 - PS417_23380 0.21 -0.9 5,060,730 - PS417_23380 0.55 +0.8 5,060,861 + PS417_23380 0.76 -0.4 5,060,906 + PS417_23380 0.83 -1.5 5,061,002 - -0.0 5,061,485 + PS417_23385 0.23 -0.9 5,061,579 + PS417_23385 0.28 -1.3 5,061,620 + PS417_23385 0.30 -2.9 5,061,720 - PS417_23385 0.35 -0.1 5,061,924 - PS417_23385 0.45 -1.3 5,061,924 - PS417_23385 0.45 +0.8 5,062,082 + PS417_23385 0.53 -1.3 5,062,082 + PS417_23385 0.53 -1.6 5,062,173 - PS417_23385 0.57 -0.6 5,062,173 - PS417_23385 0.57 -1.1 5,062,211 + PS417_23385 0.59 -1.7 5,062,212 - PS417_23385 0.59 -0.6 5,062,212 - PS417_23385 0.59 -1.2 5,062,447 + PS417_23385 0.71 -2.1 5,062,447 + PS417_23385 0.71 -0.2 5,062,466 + PS417_23385 0.72 -0.1 5,062,466 + PS417_23385 0.72 -1.0 5,062,466 + PS417_23385 0.72 -0.2 5,062,853 + -0.2 5,062,853 + -1.0 5,062,854 - -0.2 5,062,854 - +0.7 5,062,908 - -1.2 5,062,925 + +0.0 5,063,144 + PS417_23390 0.11 -0.3 5,063,145 - PS417_23390 0.11 +0.0 5,063,429 + PS417_23390 0.42 -1.3 5,063,430 - PS417_23390 0.42 -1.2 5,063,496 + PS417_23390 0.49 -1.4 5,063,656 - PS417_23390 0.66 -1.5 5,063,656 - PS417_23390 0.66 +0.6 5,063,657 + PS417_23390 0.66 -0.0 5,063,658 - PS417_23390 0.66 -1.1 5,063,666 + PS417_23390 0.67 -0.5 5,063,666 + PS417_23390 0.67 -0.6 5,063,667 - PS417_23390 0.67 -0.1 5,063,747 + PS417_23390 0.75 -1.5 5,063,748 - PS417_23390 0.75 -1.5 5,063,951 - -0.7
Or see this region's nucleotide sequence