Experiment: 80% Methanol 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22250 and PS417_22255 are separated by 144 nucleotides PS417_22255 and PS417_22260 are separated by 56 nucleotides PS417_22260 and PS417_22265 are separated by 12 nucleotides PS417_22265 and PS417_22270 are separated by 0 nucleotides
PS417_22250: PS417_22250 - pseudouridine synthase, at 4,822,349 to 4,823,560
_22250
PS417_22255: PS417_22255 - Fe-S oxidoreductase, at 4,823,705 to 4,823,896
_22255
PS417_22260: PS417_22260 - segregation and condensation protein B, at 4,823,953 to 4,824,891
_22260
PS417_22265: PS417_22265 - chromosome segregation protein ScpA, at 4,824,904 to 4,825,722
_22265
PS417_22270: PS417_22270 - hypothetical protein, at 4,825,723 to 4,826,352
_22270
Position (kb)
4823
4824
4825 Strain fitness (log2 ratio)
-1
0
1
2 at 4823.631 kb on - strand at 4823.656 kb on - strand at 4823.897 kb on - strand at 4823.919 kb on - strand at 4823.919 kb on - strand at 4824.139 kb on + strand, within PS417_22260 at 4824.140 kb on - strand, within PS417_22260 at 4824.640 kb on + strand, within PS417_22260 at 4824.996 kb on + strand at 4824.996 kb on + strand, within PS417_22265 at 4825.147 kb on - strand, within PS417_22265 at 4825.288 kb on - strand, within PS417_22265 at 4825.317 kb on - strand, within PS417_22265 at 4825.481 kb on + strand, within PS417_22265 at 4825.482 kb on - strand, within PS417_22265 at 4825.490 kb on + strand, within PS417_22265 at 4825.490 kb on + strand, within PS417_22265 at 4825.491 kb on - strand, within PS417_22265 at 4825.491 kb on - strand, within PS417_22265 at 4825.553 kb on + strand, within PS417_22265 at 4825.619 kb on + strand, within PS417_22265 at 4825.620 kb on - strand, within PS417_22265 at 4825.620 kb on - strand, within PS417_22265 at 4825.620 kb on - strand, within PS417_22265 at 4825.655 kb on + strand at 4825.656 kb on - strand at 4825.656 kb on - strand at 4825.656 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; solid stress remove 4,823,631 - -0.3 4,823,656 - +0.2 4,823,897 - -0.6 4,823,919 - +0.8 4,823,919 - +0.2 4,824,139 + PS417_22260 0.20 -0.7 4,824,140 - PS417_22260 0.20 -1.1 4,824,640 + PS417_22260 0.73 -0.6 4,824,996 + -0.3 4,824,996 + PS417_22265 0.11 +0.2 4,825,147 - PS417_22265 0.30 +0.9 4,825,288 - PS417_22265 0.47 +0.0 4,825,317 - PS417_22265 0.50 +0.7 4,825,481 + PS417_22265 0.70 +0.3 4,825,482 - PS417_22265 0.71 -0.3 4,825,490 + PS417_22265 0.72 -0.2 4,825,490 + PS417_22265 0.72 -0.6 4,825,491 - PS417_22265 0.72 -0.1 4,825,491 - PS417_22265 0.72 -0.0 4,825,553 + PS417_22265 0.79 -1.3 4,825,619 + PS417_22265 0.87 +0.1 4,825,620 - PS417_22265 0.87 +0.1 4,825,620 - PS417_22265 0.87 +0.3 4,825,620 - PS417_22265 0.87 -0.9 4,825,655 + +1.3 4,825,656 - +0.1 4,825,656 - +1.8 4,825,656 - +0.3
Or see this region's nucleotide sequence