Experiment: 80% Methanol 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14495 and PS417_14500 are separated by 24 nucleotides PS417_14500 and PS417_14505 are separated by 119 nucleotides PS417_14505 and PS417_14510 are separated by 1 nucleotides PS417_14510 and PS417_14515 overlap by 4 nucleotides
PS417_14495: PS417_14495 - maltooligosyl trehalose synthase, at 3,168,243 to 3,170,981
_14495
PS417_14500: PS417_14500 - hypothetical protein, at 3,171,006 to 3,171,278
_14500
PS417_14505: PS417_14505 - glycogen debranching protein, at 3,171,398 to 3,173,557
_14505
PS417_14510: PS417_14510 - acyl-CoA dehydrogenase, at 3,173,559 to 3,174,557
_14510
PS417_14515: PS417_14515 - acetylglucosaminylphosphatidylinositol deacetylase, at 3,174,554 to 3,175,312
_14515
Position (kb)
3171
3172
3173
3174 Strain fitness (log2 ratio)
-2
-1
0
1 at 3170.457 kb on + strand, within PS417_14495 at 3170.668 kb on - strand, within PS417_14495 at 3171.012 kb on - strand at 3171.028 kb on + strand at 3171.653 kb on + strand, within PS417_14505 at 3172.118 kb on + strand, within PS417_14505 at 3172.119 kb on - strand at 3172.250 kb on + strand, within PS417_14505 at 3172.319 kb on + strand, within PS417_14505 at 3172.319 kb on + strand, within PS417_14505 at 3172.352 kb on + strand, within PS417_14505 at 3172.352 kb on + strand, within PS417_14505 at 3172.353 kb on - strand, within PS417_14505 at 3172.353 kb on - strand, within PS417_14505 at 3173.195 kb on + strand, within PS417_14505 at 3173.195 kb on + strand, within PS417_14505 at 3174.471 kb on + strand at 3174.471 kb on + strand at 3174.471 kb on + strand at 3174.472 kb on - strand at 3174.472 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; solid stress remove 3,170,457 + PS417_14495 0.81 -0.2 3,170,668 - PS417_14495 0.89 +0.8 3,171,012 - +0.8 3,171,028 + -0.0 3,171,653 + PS417_14505 0.12 -0.4 3,172,118 + PS417_14505 0.33 -1.0 3,172,119 - +1.3 3,172,250 + PS417_14505 0.39 -1.3 3,172,319 + PS417_14505 0.43 +0.7 3,172,319 + PS417_14505 0.43 -1.2 3,172,352 + PS417_14505 0.44 -1.4 3,172,352 + PS417_14505 0.44 +0.3 3,172,353 - PS417_14505 0.44 -0.4 3,172,353 - PS417_14505 0.44 -1.8 3,173,195 + PS417_14505 0.83 -1.5 3,173,195 + PS417_14505 0.83 +0.7 3,174,471 + -0.3 3,174,471 + +0.5 3,174,471 + +0.9 3,174,472 - -0.8 3,174,472 - +0.2
Or see this region's nucleotide sequence