Experiment: Fraxetin 1 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02760 and PS417_02765 are separated by 71 nucleotides PS417_02765 and PS417_02770 are separated by 193 nucleotides PS417_02770 and PS417_02775 are separated by 135 nucleotides
PS417_02760: PS417_02760 - AraC family transcriptional regulator, at 628,243 to 629,031
_02760
PS417_02765: PS417_02765 - phosphate starvation-inducible protein PsiF, at 629,103 to 629,405
_02765
PS417_02770: PS417_02770 - membrane protein, at 629,599 to 630,612
_02770
PS417_02775: PS417_02775 - heat-shock protein, at 630,748 to 632,016
_02775
Position (kb) 629
630
631 Strain fitness (log2 ratio) -2
-1
0
1
2 at 629.037 kb on + strand at 629.038 kb on - strand at 629.051 kb on + strand at 629.051 kb on + strand at 629.051 kb on + strand at 629.052 kb on - strand at 629.183 kb on + strand, within PS417_02765 at 629.599 kb on - strand at 629.599 kb on - strand at 629.627 kb on + strand at 629.641 kb on + strand at 629.641 kb on + strand at 629.641 kb on + strand at 629.641 kb on + strand at 629.641 kb on + strand at 629.641 kb on + strand at 629.641 kb on + strand at 629.642 kb on - strand at 629.642 kb on - strand at 629.642 kb on - strand at 629.822 kb on + strand, within PS417_02770 at 629.823 kb on - strand, within PS417_02770 at 630.445 kb on + strand, within PS417_02770 at 630.807 kb on + strand at 631.268 kb on + strand, within PS417_02775 at 631.268 kb on + strand, within PS417_02775 at 631.269 kb on - strand, within PS417_02775
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; liquid stress remove 629,037 + -1.1 629,038 - +0.1 629,051 + +0.9 629,051 + +0.2 629,051 + +0.2 629,052 - +0.2 629,183 + PS417_02765 0.26 -0.4 629,599 - +1.2 629,599 - -0.0 629,627 + -0.8 629,641 + -0.4 629,641 + -1.9 629,641 + +0.5 629,641 + +0.2 629,641 + +0.0 629,641 + +0.1 629,641 + +0.6 629,642 - -0.4 629,642 - +0.5 629,642 - +1.9 629,822 + PS417_02770 0.22 +0.4 629,823 - PS417_02770 0.22 -1.0 630,445 + PS417_02770 0.83 -0.5 630,807 + +0.1 631,268 + PS417_02775 0.41 +0.8 631,268 + PS417_02775 0.41 -0.5 631,269 - PS417_02775 0.41 -0.8
Or see this region's nucleotide sequence