Experiment: Fraxetin 1 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22210 and PS417_22215 are separated by 160 nucleotides PS417_22215 and PS417_22220 are separated by 352 nucleotides PS417_22220 and PS417_22225 are separated by 105 nucleotides
PS417_22210: PS417_22210 - AraC family transcriptional regulator, at 4,815,033 to 4,816,091
_22210
PS417_22215: PS417_22215 - membrane protein, at 4,816,252 to 4,816,563
_22215
PS417_22220: PS417_22220 - hypothetical protein, at 4,816,916 to 4,817,098
_22220
PS417_22225: PS417_22225 - MFS transporter, at 4,817,204 to 4,818,400
_22225
Position (kb)
4816
4817 Strain fitness (log2 ratio)
-1
0
1
2 at 4815.425 kb on - strand, within PS417_22210 at 4815.425 kb on - strand, within PS417_22210 at 4815.521 kb on - strand, within PS417_22210 at 4815.709 kb on - strand, within PS417_22210 at 4815.728 kb on - strand, within PS417_22210 at 4816.103 kb on - strand at 4816.105 kb on + strand at 4816.141 kb on + strand at 4816.144 kb on + strand at 4816.144 kb on + strand at 4816.156 kb on + strand at 4816.156 kb on + strand at 4816.156 kb on + strand at 4816.156 kb on + strand at 4816.157 kb on - strand at 4816.157 kb on - strand at 4816.157 kb on - strand at 4816.157 kb on - strand at 4816.173 kb on - strand at 4816.198 kb on - strand at 4816.291 kb on + strand, within PS417_22215 at 4816.301 kb on - strand, within PS417_22215 at 4816.301 kb on - strand, within PS417_22215 at 4816.434 kb on + strand, within PS417_22215 at 4816.435 kb on - strand, within PS417_22215 at 4816.501 kb on + strand, within PS417_22215 at 4816.529 kb on - strand, within PS417_22215 at 4816.637 kb on + strand at 4816.637 kb on + strand at 4816.638 kb on - strand at 4816.722 kb on - strand at 4816.722 kb on - strand at 4816.725 kb on + strand at 4816.726 kb on - strand at 4816.726 kb on - strand at 4816.726 kb on - strand at 4816.726 kb on - strand at 4816.752 kb on + strand at 4817.170 kb on + strand at 4817.256 kb on + strand at 4817.256 kb on + strand at 4817.257 kb on - strand at 4817.316 kb on - strand at 4817.316 kb on - strand at 4817.316 kb on - strand at 4817.375 kb on + strand, within PS417_22225 at 4817.376 kb on - strand, within PS417_22225
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; liquid stress remove 4,815,425 - PS417_22210 0.37 -0.9 4,815,425 - PS417_22210 0.37 -0.0 4,815,521 - PS417_22210 0.46 +1.9 4,815,709 - PS417_22210 0.64 +0.8 4,815,728 - PS417_22210 0.66 +0.3 4,816,103 - -0.8 4,816,105 + +0.2 4,816,141 + +0.2 4,816,144 + -0.2 4,816,144 + +0.2 4,816,156 + +0.2 4,816,156 + +0.3 4,816,156 + -0.8 4,816,156 + +0.5 4,816,157 - +2.0 4,816,157 - +0.7 4,816,157 - +0.1 4,816,157 - +0.4 4,816,173 - +0.0 4,816,198 - +2.2 4,816,291 + PS417_22215 0.12 -0.5 4,816,301 - PS417_22215 0.16 -1.4 4,816,301 - PS417_22215 0.16 -0.2 4,816,434 + PS417_22215 0.58 -0.3 4,816,435 - PS417_22215 0.59 -0.6 4,816,501 + PS417_22215 0.80 -0.3 4,816,529 - PS417_22215 0.89 -0.2 4,816,637 + +0.7 4,816,637 + +1.3 4,816,638 - +0.7 4,816,722 - -0.2 4,816,722 - -0.3 4,816,725 + +0.2 4,816,726 - -0.0 4,816,726 - +0.5 4,816,726 - +1.5 4,816,726 - +0.7 4,816,752 + +0.4 4,817,170 + +2.0 4,817,256 + -0.3 4,817,256 + -0.1 4,817,257 - -1.4 4,817,316 - +0.2 4,817,316 - +1.2 4,817,316 - -0.6 4,817,375 + PS417_22225 0.14 -0.1 4,817,376 - PS417_22225 0.14 +0.8
Or see this region's nucleotide sequence