Experiment: Fraxetin 1 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00655 and PS417_00660 are separated by 15 nucleotides PS417_00660 and PS417_00665 overlap by 4 nucleotides
PS417_00655: PS417_00655 - DSBA oxidoreductase, at 133,695 to 135,230
_00655
PS417_00660: PS417_00660 - DSBA oxidoreductase, at 135,246 to 136,304
_00660
PS417_00665: PS417_00665 - RND transporter, at 136,301 to 137,746
_00665
Position (kb) 135
136
137 Strain fitness (log2 ratio) -2
-1
0
1 at 134.847 kb on + strand, within PS417_00655 at 134.847 kb on + strand, within PS417_00655 at 134.999 kb on + strand, within PS417_00655 at 135.141 kb on + strand at 135.142 kb on - strand at 135.144 kb on + strand at 135.144 kb on + strand at 135.145 kb on - strand at 135.309 kb on + strand at 135.310 kb on - strand at 135.310 kb on - strand at 135.518 kb on + strand, within PS417_00660 at 135.870 kb on + strand, within PS417_00660 at 135.871 kb on - strand, within PS417_00660 at 135.933 kb on + strand, within PS417_00660 at 135.933 kb on + strand, within PS417_00660 at 135.984 kb on + strand, within PS417_00660 at 135.985 kb on - strand, within PS417_00660 at 136.023 kb on - strand, within PS417_00660 at 136.292 kb on - strand at 136.502 kb on - strand, within PS417_00665 at 136.502 kb on - strand, within PS417_00665 at 136.625 kb on + strand, within PS417_00665 at 136.626 kb on - strand, within PS417_00665 at 136.848 kb on - strand, within PS417_00665 at 136.867 kb on - strand, within PS417_00665 at 136.867 kb on - strand, within PS417_00665 at 137.000 kb on - strand, within PS417_00665
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; liquid stress remove 134,847 + PS417_00655 0.75 -1.3 134,847 + PS417_00655 0.75 -1.5 134,999 + PS417_00655 0.85 -1.9 135,141 + -1.0 135,142 - -0.0 135,144 + -1.1 135,144 + -1.8 135,145 - -1.4 135,309 + -1.1 135,310 - -1.3 135,310 - -0.1 135,518 + PS417_00660 0.26 +0.9 135,870 + PS417_00660 0.59 -0.7 135,871 - PS417_00660 0.59 -0.3 135,933 + PS417_00660 0.65 -1.8 135,933 + PS417_00660 0.65 -1.7 135,984 + PS417_00660 0.70 -0.5 135,985 - PS417_00660 0.70 -0.8 136,023 - PS417_00660 0.73 -1.1 136,292 - -1.4 136,502 - PS417_00665 0.14 -1.4 136,502 - PS417_00665 0.14 -0.8 136,625 + PS417_00665 0.22 -0.7 136,626 - PS417_00665 0.22 -1.4 136,848 - PS417_00665 0.38 -1.7 136,867 - PS417_00665 0.39 -1.1 136,867 - PS417_00665 0.39 +0.0 137,000 - PS417_00665 0.48 -2.3
Or see this region's nucleotide sequence