Experiment: Scopoletin 1 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12780 and PS417_12785 are separated by 184 nucleotides PS417_12785 and PS417_12790 are separated by 120 nucleotides PS417_12790 and PS417_12795 are separated by 358 nucleotides
PS417_12780: PS417_12780 - (Fe-S)-binding protein, at 2,791,935 to 2,793,344
_12780
PS417_12785: PS417_12785 - hypothetical protein, at 2,793,529 to 2,793,768
_12785
PS417_12790: PS417_12790 - methyltransferase, at 2,793,889 to 2,794,380
_12790
PS417_12795: PS417_12795 - alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, at 2,794,739 to 2,796,721
_12795
Position (kb)
2793
2794 Strain fitness (log2 ratio)
-1
0
1
2 at 2792.650 kb on - strand, within PS417_12780 at 2792.650 kb on - strand, within PS417_12780 at 2792.719 kb on + strand, within PS417_12780 at 2792.719 kb on + strand, within PS417_12780 at 2792.720 kb on - strand, within PS417_12780 at 2792.720 kb on - strand, within PS417_12780 at 2793.231 kb on - strand at 2793.258 kb on - strand at 2793.382 kb on + strand at 2793.383 kb on - strand at 2793.383 kb on - strand at 2793.624 kb on - strand, within PS417_12785 at 2793.624 kb on - strand, within PS417_12785 at 2793.624 kb on - strand at 2793.624 kb on - strand, within PS417_12785 at 2793.681 kb on + strand, within PS417_12785 at 2793.737 kb on + strand, within PS417_12785 at 2793.737 kb on + strand, within PS417_12785 at 2793.737 kb on + strand, within PS417_12785 at 2793.738 kb on - strand, within PS417_12785 at 2793.738 kb on - strand, within PS417_12785 at 2793.738 kb on - strand, within PS417_12785 at 2794.314 kb on + strand, within PS417_12790 at 2794.652 kb on - strand at 2794.654 kb on + strand at 2794.722 kb on + strand at 2794.752 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 1 mM; liquid stress remove 2,792,650 - PS417_12780 0.51 -1.0 2,792,650 - PS417_12780 0.51 +0.9 2,792,719 + PS417_12780 0.56 -0.2 2,792,719 + PS417_12780 0.56 -0.1 2,792,720 - PS417_12780 0.56 -0.2 2,792,720 - PS417_12780 0.56 +0.6 2,793,231 - +0.4 2,793,258 - -0.1 2,793,382 + +2.2 2,793,383 - -0.8 2,793,383 - -0.0 2,793,624 - PS417_12785 0.40 -0.2 2,793,624 - PS417_12785 0.40 +0.1 2,793,624 - -0.4 2,793,624 - PS417_12785 0.40 -0.4 2,793,681 + PS417_12785 0.63 -0.1 2,793,737 + PS417_12785 0.87 +0.8 2,793,737 + PS417_12785 0.87 +0.0 2,793,737 + PS417_12785 0.87 -0.5 2,793,738 - PS417_12785 0.87 -0.4 2,793,738 - PS417_12785 0.87 +0.5 2,793,738 - PS417_12785 0.87 +0.5 2,794,314 + PS417_12790 0.86 -0.4 2,794,652 - -0.2 2,794,654 + -1.4 2,794,722 + +0.4 2,794,752 + +0.5
Or see this region's nucleotide sequence