Experiment: 20 hr rep1_No_BD100_grewON
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ftsX and ftsE overlap by 8 nucleotides ftsE and ftsY are separated by 2 nucleotides
b3462: ftsX - predicted transporter subunit: membrane component of ABC superfamily (NCBI), at 3,599,051 to 3,600,109
ftsX
b3463: ftsE - predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI), at 3,600,102 to 3,600,770
ftsE
b3464: ftsY - fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein (NCBI), at 3,600,773 to 3,602,266
ftsY
Position (kb)
3600
3601 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3599.283 kb on - strand, within ftsX at 3599.294 kb on - strand, within ftsX at 3599.655 kb on + strand, within ftsX at 3599.655 kb on + strand, within ftsX at 3599.720 kb on - strand, within ftsX at 3599.722 kb on - strand, within ftsX at 3599.795 kb on + strand, within ftsX at 3599.832 kb on + strand, within ftsX at 3599.840 kb on - strand, within ftsX at 3599.945 kb on - strand, within ftsX at 3599.945 kb on - strand, within ftsX at 3599.972 kb on - strand, within ftsX at 3600.020 kb on + strand at 3600.042 kb on + strand at 3600.042 kb on + strand at 3600.106 kb on - strand at 3600.117 kb on + strand at 3600.126 kb on - strand at 3600.126 kb on - strand at 3600.145 kb on - strand at 3600.147 kb on - strand at 3600.147 kb on - strand at 3600.157 kb on - strand at 3600.184 kb on - strand, within ftsE at 3600.286 kb on + strand, within ftsE at 3600.304 kb on + strand, within ftsE at 3600.309 kb on + strand, within ftsE at 3600.362 kb on + strand, within ftsE at 3600.412 kb on + strand, within ftsE at 3600.451 kb on + strand, within ftsE at 3600.485 kb on - strand, within ftsE at 3600.490 kb on - strand, within ftsE at 3600.604 kb on + strand, within ftsE at 3600.612 kb on - strand, within ftsE at 3600.692 kb on + strand, within ftsE at 3600.692 kb on + strand, within ftsE at 3600.719 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 20 hr rep1_No_BD100_grewON remove 3,599,283 - ftsX b3462 0.22 +1.8 3,599,294 - ftsX b3462 0.23 -0.8 3,599,655 + ftsX b3462 0.57 +0.8 3,599,655 + ftsX b3462 0.57 +0.2 3,599,720 - ftsX b3462 0.63 -0.2 3,599,722 - ftsX b3462 0.63 +1.8 3,599,795 + ftsX b3462 0.70 +0.2 3,599,832 + ftsX b3462 0.74 -1.2 3,599,840 - ftsX b3462 0.75 -0.5 3,599,945 - ftsX b3462 0.84 -0.0 3,599,945 - ftsX b3462 0.84 -0.3 3,599,972 - ftsX b3462 0.87 +0.9 3,600,020 + -1.7 3,600,042 + -0.1 3,600,042 + +1.2 3,600,106 - +0.3 3,600,117 + +0.2 3,600,126 - +0.1 3,600,126 - +0.2 3,600,145 - -0.9 3,600,147 - -1.0 3,600,147 - -1.8 3,600,157 - +0.2 3,600,184 - ftsE b3463 0.12 +0.8 3,600,286 + ftsE b3463 0.28 +1.5 3,600,304 + ftsE b3463 0.30 +1.8 3,600,309 + ftsE b3463 0.31 -0.8 3,600,362 + ftsE b3463 0.39 +1.8 3,600,412 + ftsE b3463 0.46 +1.8 3,600,451 + ftsE b3463 0.52 +0.2 3,600,485 - ftsE b3463 0.57 -1.4 3,600,490 - ftsE b3463 0.58 +0.2 3,600,604 + ftsE b3463 0.75 -0.8 3,600,612 - ftsE b3463 0.76 +1.8 3,600,692 + ftsE b3463 0.88 +1.8 3,600,692 + ftsE b3463 0.88 -0.5 3,600,719 - +0.8
Or see this region's nucleotide sequence