Strain Fitness in Escherichia coli BW25113 around b2122

Experiment: 6 hr rep2_HD100_10fold_dilution_grewON

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	6 hr rep2_HD100_10fold_dilution_grewON
2,206,144	+	yehP	b2121	0.14	-0.6
2,206,144	-	yehP	b2121	0.14	-4.7
2,206,144	-	yehP	b2121	0.14	+0.4
2,206,189	+	yehP	b2121	0.18	+0.6
2,206,202	-	yehP	b2121	0.19	+2.0
2,206,257	-	yehP	b2121	0.24	-0.6
2,206,257	-	yehP	b2121	0.24	+0.8
2,206,296	-	yehP	b2121	0.27	+1.1
2,206,390	-	yehP	b2121	0.35	-4.9
2,206,390	-	yehP	b2121	0.35	+1.1
2,206,547	+	yehP	b2121	0.49	+0.1
2,206,547	+	yehP	b2121	0.49	-1.3
2,206,609	+	yehP	b2121	0.55	-1.9
2,206,686	+	yehP	b2121	0.61	+1.0
2,206,776	-	yehP	b2121	0.69	-0.6
2,206,809	+	yehP	b2121	0.72	-4.8
2,206,809	+	yehP	b2121	0.72	+0.1
2,206,824	-	yehP	b2121	0.73	-4.6
2,206,855	-	yehP	b2121	0.76	-0.9
2,207,171	-				+0.6
2,207,171	-				+1.7
2,207,253	-				-0.0
2,207,469	+	yehQ	b2122	0.17	+1.4
2,207,500	-	yehQ	b2122	0.19	-4.5
2,207,524	+	yehQ	b2122	0.20	-3.4
2,207,629	+	yehQ	b2122	0.25	+0.1
2,207,682	-	yehQ	b2122	0.28	-1.1
2,207,949	-	yehQ	b2122	0.41	+1.2
2,208,004	+	yehQ	b2122	0.44	-0.6
2,208,048	+	yehQ	b2122	0.46	-0.4
2,208,088	+	yehQ	b2122	0.48	-2.3
2,208,096	-	yehQ	b2122	0.49	+0.2
2,208,153	+	yehQ	b2122	0.52	-3.8
2,208,204	+	yehQ	b2122	0.54	+0.6
2,208,264	-	yehQ	b2122	0.57	-3.9
2,208,566	+	yehQ	b2122	0.72	+0.0
2,208,624	-	yehQ	b2122	0.75	+0.6
2,208,642	-	yehQ	b2122	0.76	-0.6
2,208,679	-	yehQ	b2122	0.78	-0.9
2,208,766	+	yehQ	b2122	0.82	-3.4
2,208,861	+	yehQ	b2122	0.87	-0.4
2,208,861	+	yehQ	b2122	0.87	-3.2
2,208,866	+	yehQ	b2122	0.87	-0.7
2,208,869	-	yehQ	b2122	0.87	+0.2
2,208,891	+	yehQ	b2122	0.88	-3.0
2,208,905	+	yehQ	b2122	0.89	+0.4
2,208,905	+	yehQ	b2122	0.89	-5.2
2,208,913	-	yehQ	b2122	0.90	+0.4
2,208,924	-				-1.1
2,208,932	-				-0.3
2,208,940	-				+0.7
2,208,943	-				-4.1
2,208,943	-				+0.6
2,208,950	+				+2.5
2,208,960	+				-3.2
2,208,980	+				-0.8
2,208,980	+				-0.0
2,208,980	+				+2.2
2,209,024	-				+1.2
2,209,063	+				+0.5
2,209,113	-				+0.1
2,209,125	-				+0.5
2,209,125	-				-2.5
2,209,154	+				-0.2
2,209,154	+				+0.3
2,209,157	-				+2.2
2,209,157	-				-3.1
2,209,162	-				-0.9
2,209,164	+				+0.7
2,209,164	+				+1.8
2,209,172	-				+2.1
2,209,172	-				+0.0
2,209,172	-				-3.6
2,209,172	-				-2.5
2,209,176	+				-0.3
2,209,184	-				-3.7
2,209,184	-				-2.8
2,209,187	+				-0.7
2,209,187	+				-0.1
2,209,189	+				-4.8
2,209,195	-				+0.9
2,209,195	-				-0.9
2,209,195	-				-3.8
2,209,206	-				+0.1
2,209,208	+				+1.3
2,209,352	-	yehR	b2123	0.23	-3.8
2,209,352	-	yehR	b2123	0.23	+0.3
2,209,377	+	yehR	b2123	0.28	-4.4
2,209,377	+	yehR	b2123	0.28	+1.7
2,209,390	-	yehR	b2123	0.31	+0.6
2,209,396	+	yehR	b2123	0.32	+0.7
2,209,449	-	yehR	b2123	0.44	-1.1
2,209,962	-	yehS	b2124	0.45	+0.0
2,209,962	-	yehS	b2124	0.45	+0.1
2,209,964	-	yehS	b2124	0.46	+0.9
2,209,966	-	yehS	b2124	0.46	+1.1
2,209,966	-	yehS	b2124	0.46	+2.0
2,210,041	-	yehS	b2124	0.62	+0.0
2,210,106	-	yehS	b2124	0.76	-0.1
2,210,106	-	yehS	b2124	0.76	+1.7