Experiment: Fraxetin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13690 and PS417_13695 are separated by 110 nucleotides PS417_13695 and PS417_13705 are separated by 357 nucleotides
PS417_13690: PS417_13690 - chemotaxis protein, at 3,012,210 to 3,013,565
_13690
PS417_13695: PS417_13695 - porin, at 3,013,676 to 3,014,998
_13695
PS417_13705: PS417_13705 - oxaloacetate decarboxylase, at 3,015,356 to 3,016,225
_13705
Position (kb)
3013
3014
3015 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3012.730 kb on + strand, within PS417_13690 at 3012.730 kb on + strand, within PS417_13690 at 3012.730 kb on + strand at 3012.731 kb on - strand at 3012.800 kb on + strand, within PS417_13690 at 3012.810 kb on + strand, within PS417_13690 at 3012.810 kb on + strand, within PS417_13690 at 3012.811 kb on - strand, within PS417_13690 at 3012.811 kb on - strand, within PS417_13690 at 3012.910 kb on - strand at 3012.910 kb on - strand at 3012.910 kb on - strand, within PS417_13690 at 3012.919 kb on + strand, within PS417_13690 at 3012.921 kb on + strand, within PS417_13690 at 3012.921 kb on + strand, within PS417_13690 at 3012.922 kb on - strand, within PS417_13690 at 3013.023 kb on + strand, within PS417_13690 at 3013.023 kb on + strand, within PS417_13690 at 3013.028 kb on + strand, within PS417_13690 at 3013.028 kb on + strand, within PS417_13690 at 3013.029 kb on - strand, within PS417_13690 at 3013.619 kb on + strand at 3013.619 kb on + strand at 3013.619 kb on + strand at 3013.632 kb on + strand at 3013.633 kb on - strand at 3013.633 kb on - strand at 3013.633 kb on - strand at 3013.673 kb on + strand at 3013.677 kb on + strand at 3013.677 kb on + strand at 3013.677 kb on + strand at 3013.677 kb on + strand at 3013.677 kb on + strand at 3013.677 kb on + strand at 3013.678 kb on - strand at 3013.678 kb on - strand at 3013.678 kb on - strand at 3013.678 kb on - strand at 3013.678 kb on - strand at 3013.812 kb on + strand, within PS417_13695 at 3013.813 kb on - strand, within PS417_13695 at 3013.813 kb on - strand, within PS417_13695 at 3013.918 kb on + strand at 3013.920 kb on + strand, within PS417_13695 at 3013.920 kb on + strand, within PS417_13695 at 3013.920 kb on + strand, within PS417_13695 at 3013.953 kb on + strand, within PS417_13695 at 3013.953 kb on + strand, within PS417_13695 at 3013.954 kb on - strand, within PS417_13695 at 3013.954 kb on - strand, within PS417_13695 at 3014.088 kb on + strand at 3014.157 kb on + strand, within PS417_13695 at 3014.294 kb on - strand, within PS417_13695 at 3014.294 kb on - strand, within PS417_13695 at 3014.294 kb on - strand, within PS417_13695 at 3014.295 kb on + strand, within PS417_13695 at 3014.295 kb on + strand, within PS417_13695 at 3014.295 kb on + strand, within PS417_13695 at 3014.295 kb on + strand, within PS417_13695 at 3014.295 kb on + strand, within PS417_13695 at 3014.296 kb on - strand, within PS417_13695 at 3014.296 kb on - strand, within PS417_13695 at 3014.298 kb on + strand, within PS417_13695 at 3014.298 kb on + strand, within PS417_13695 at 3014.299 kb on - strand, within PS417_13695 at 3014.331 kb on + strand, within PS417_13695 at 3014.331 kb on + strand, within PS417_13695 at 3014.364 kb on + strand, within PS417_13695 at 3014.364 kb on + strand, within PS417_13695 at 3014.418 kb on + strand, within PS417_13695 at 3014.418 kb on + strand, within PS417_13695 at 3014.419 kb on - strand at 3014.419 kb on - strand, within PS417_13695 at 3014.419 kb on - strand, within PS417_13695 at 3014.422 kb on + strand, within PS417_13695 at 3014.740 kb on - strand, within PS417_13695 at 3014.856 kb on + strand, within PS417_13695 at 3014.859 kb on + strand, within PS417_13695 at 3014.860 kb on - strand, within PS417_13695 at 3014.860 kb on - strand, within PS417_13695 at 3014.975 kb on + strand at 3015.018 kb on - strand at 3015.070 kb on - strand at 3015.070 kb on - strand at 3015.107 kb on + strand at 3015.331 kb on + strand at 3015.332 kb on - strand at 3015.358 kb on - strand at 3015.365 kb on + strand at 3015.365 kb on + strand at 3015.366 kb on - strand at 3015.366 kb on - strand at 3015.413 kb on - strand at 3015.413 kb on - strand at 3015.413 kb on - strand at 3015.413 kb on - strand at 3015.413 kb on - strand at 3015.413 kb on - strand at 3015.414 kb on + strand at 3015.414 kb on + strand at 3015.414 kb on + strand at 3015.414 kb on + strand at 3015.414 kb on + strand at 3015.414 kb on + strand at 3015.414 kb on + strand at 3015.415 kb on - strand at 3015.415 kb on - strand at 3015.415 kb on - strand at 3015.415 kb on - strand at 3015.489 kb on + strand, within PS417_13705 at 3015.490 kb on - strand, within PS417_13705 at 3015.514 kb on - strand, within PS417_13705 at 3015.514 kb on - strand, within PS417_13705 at 3015.592 kb on - strand, within PS417_13705 at 3015.592 kb on - strand, within PS417_13705 at 3015.824 kb on - strand, within PS417_13705
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; liquid stress remove 3,012,730 + PS417_13690 0.38 -0.5 3,012,730 + PS417_13690 0.38 -0.1 3,012,730 + +0.7 3,012,731 - +0.5 3,012,800 + PS417_13690 0.44 -0.1 3,012,810 + PS417_13690 0.44 +0.7 3,012,810 + PS417_13690 0.44 +0.3 3,012,811 - PS417_13690 0.44 +0.9 3,012,811 - PS417_13690 0.44 -0.0 3,012,910 - -0.3 3,012,910 - +1.9 3,012,910 - PS417_13690 0.52 -0.4 3,012,919 + PS417_13690 0.52 -0.0 3,012,921 + PS417_13690 0.52 -0.4 3,012,921 + PS417_13690 0.52 +0.2 3,012,922 - PS417_13690 0.53 +1.0 3,013,023 + PS417_13690 0.60 +0.1 3,013,023 + PS417_13690 0.60 +1.4 3,013,028 + PS417_13690 0.60 -0.6 3,013,028 + PS417_13690 0.60 +0.8 3,013,029 - PS417_13690 0.60 +0.0 3,013,619 + +1.2 3,013,619 + -0.4 3,013,619 + +0.1 3,013,632 + -0.5 3,013,633 - -0.1 3,013,633 - +0.1 3,013,633 - +0.2 3,013,673 + -1.1 3,013,677 + -1.0 3,013,677 + -0.8 3,013,677 + +0.5 3,013,677 + -0.1 3,013,677 + +0.1 3,013,677 + +0.1 3,013,678 - -0.1 3,013,678 - +1.0 3,013,678 - +0.0 3,013,678 - -0.2 3,013,678 - -0.0 3,013,812 + PS417_13695 0.10 -0.1 3,013,813 - PS417_13695 0.10 -0.2 3,013,813 - PS417_13695 0.10 -0.0 3,013,918 + +0.7 3,013,920 + PS417_13695 0.18 +0.2 3,013,920 + PS417_13695 0.18 +0.3 3,013,920 + PS417_13695 0.18 -0.3 3,013,953 + PS417_13695 0.21 +0.3 3,013,953 + PS417_13695 0.21 -0.7 3,013,954 - PS417_13695 0.21 -0.4 3,013,954 - PS417_13695 0.21 -0.1 3,014,088 + +0.9 3,014,157 + PS417_13695 0.36 -0.2 3,014,294 - PS417_13695 0.47 +0.5 3,014,294 - PS417_13695 0.47 -0.4 3,014,294 - PS417_13695 0.47 -1.7 3,014,295 + PS417_13695 0.47 +0.2 3,014,295 + PS417_13695 0.47 -0.4 3,014,295 + PS417_13695 0.47 -0.6 3,014,295 + PS417_13695 0.47 +0.3 3,014,295 + PS417_13695 0.47 -0.1 3,014,296 - PS417_13695 0.47 +0.3 3,014,296 - PS417_13695 0.47 +0.4 3,014,298 + PS417_13695 0.47 -0.1 3,014,298 + PS417_13695 0.47 -0.2 3,014,299 - PS417_13695 0.47 -0.1 3,014,331 + PS417_13695 0.50 +0.3 3,014,331 + PS417_13695 0.50 -0.7 3,014,364 + PS417_13695 0.52 +0.4 3,014,364 + PS417_13695 0.52 +0.7 3,014,418 + PS417_13695 0.56 -0.2 3,014,418 + PS417_13695 0.56 -0.2 3,014,419 - +3.4 3,014,419 - PS417_13695 0.56 -0.2 3,014,419 - PS417_13695 0.56 +0.1 3,014,422 + PS417_13695 0.56 +0.2 3,014,740 - PS417_13695 0.80 -0.5 3,014,856 + PS417_13695 0.89 -0.2 3,014,859 + PS417_13695 0.89 -0.8 3,014,860 - PS417_13695 0.89 -0.1 3,014,860 - PS417_13695 0.89 +0.3 3,014,975 + -0.3 3,015,018 - +0.2 3,015,070 - +1.2 3,015,070 - +0.3 3,015,107 + +0.8 3,015,331 + +0.0 3,015,332 - -0.4 3,015,358 - +1.3 3,015,365 + +0.7 3,015,365 + +0.1 3,015,366 - +0.5 3,015,366 - +0.0 3,015,413 - +0.2 3,015,413 - -0.2 3,015,413 - -0.5 3,015,413 - -0.3 3,015,413 - +0.3 3,015,413 - +0.1 3,015,414 + -0.1 3,015,414 + +0.2 3,015,414 + -0.2 3,015,414 + +0.2 3,015,414 + -0.1 3,015,414 + +0.5 3,015,414 + -0.3 3,015,415 - +0.2 3,015,415 - -0.7 3,015,415 - -1.6 3,015,415 - -0.9 3,015,489 + PS417_13705 0.15 +0.6 3,015,490 - PS417_13705 0.15 -0.0 3,015,514 - PS417_13705 0.18 +0.2 3,015,514 - PS417_13705 0.18 -0.2 3,015,592 - PS417_13705 0.27 +0.3 3,015,592 - PS417_13705 0.27 +0.1 3,015,824 - PS417_13705 0.54 +0.4
Or see this region's nucleotide sequence