Experiment: Fraxetin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_10640 and PS417_10645 are separated by 421 nucleotides PS417_10645 and PS417_10650 are separated by 16 nucleotides
PS417_10640: PS417_10640 - GNAT family acetyltransferase, at 2,269,802 to 2,270,404
_10640
PS417_10645: PS417_10645 - magnesium ABC transporter ATPase, at 2,270,826 to 2,273,531
_10645
PS417_10650: PS417_10650 - methyltransferase, at 2,273,548 to 2,274,264
_10650
Position (kb)
2270
2271
2272
2273
2274 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2269.916 kb on + strand at 2269.917 kb on - strand, within PS417_10640 at 2270.012 kb on + strand, within PS417_10640 at 2270.012 kb on + strand, within PS417_10640 at 2270.013 kb on - strand, within PS417_10640 at 2270.262 kb on - strand, within PS417_10640 at 2270.271 kb on + strand at 2270.272 kb on - strand, within PS417_10640 at 2270.360 kb on + strand at 2270.360 kb on + strand at 2270.360 kb on + strand at 2270.361 kb on - strand at 2270.361 kb on - strand at 2270.457 kb on - strand at 2270.477 kb on + strand at 2270.478 kb on - strand at 2270.520 kb on + strand at 2270.520 kb on + strand at 2270.538 kb on + strand at 2270.538 kb on + strand at 2270.539 kb on - strand at 2270.710 kb on + strand at 2270.758 kb on + strand at 2270.761 kb on - strand at 2271.072 kb on + strand at 2271.621 kb on + strand, within PS417_10645 at 2271.622 kb on - strand, within PS417_10645 at 2272.056 kb on + strand, within PS417_10645 at 2272.057 kb on - strand, within PS417_10645 at 2272.059 kb on + strand, within PS417_10645 at 2272.413 kb on + strand, within PS417_10645 at 2272.413 kb on + strand, within PS417_10645 at 2272.413 kb on + strand, within PS417_10645 at 2272.413 kb on + strand, within PS417_10645 at 2272.413 kb on + strand, within PS417_10645 at 2272.413 kb on + strand, within PS417_10645 at 2272.413 kb on + strand at 2272.413 kb on + strand at 2272.413 kb on + strand, within PS417_10645 at 2272.413 kb on + strand, within PS417_10645 at 2272.414 kb on - strand, within PS417_10645 at 2272.414 kb on - strand, within PS417_10645 at 2272.414 kb on - strand at 2272.414 kb on - strand, within PS417_10645 at 2272.414 kb on - strand, within PS417_10645 at 2272.414 kb on - strand, within PS417_10645 at 2272.415 kb on + strand, within PS417_10645 at 2272.416 kb on - strand, within PS417_10645 at 2272.926 kb on + strand, within PS417_10645 at 2273.043 kb on + strand, within PS417_10645 at 2273.043 kb on + strand, within PS417_10645 at 2273.199 kb on + strand, within PS417_10645 at 2273.199 kb on + strand, within PS417_10645 at 2273.200 kb on - strand at 2273.200 kb on - strand, within PS417_10645 at 2273.410 kb on - strand at 2273.439 kb on + strand at 2273.446 kb on + strand at 2273.472 kb on + strand at 2273.472 kb on + strand at 2273.473 kb on - strand at 2273.505 kb on + strand at 2273.505 kb on + strand at 2273.505 kb on + strand at 2273.505 kb on + strand at 2273.505 kb on + strand at 2273.505 kb on + strand at 2273.505 kb on + strand at 2273.506 kb on - strand at 2273.513 kb on + strand at 2273.530 kb on - strand at 2273.547 kb on + strand at 2273.547 kb on + strand at 2273.548 kb on - strand at 2273.548 kb on - strand at 2273.767 kb on + strand, within PS417_10650 at 2274.308 kb on - strand at 2274.341 kb on + strand at 2274.357 kb on - strand at 2274.417 kb on + strand at 2274.417 kb on + strand at 2274.431 kb on + strand at 2274.450 kb on + strand at 2274.450 kb on + strand at 2274.451 kb on - strand at 2274.451 kb on - strand at 2274.451 kb on - strand at 2274.454 kb on - strand at 2274.459 kb on + strand at 2274.460 kb on - strand at 2274.460 kb on - strand at 2274.513 kb on + strand at 2274.513 kb on + strand at 2274.517 kb on + strand at 2274.518 kb on - strand at 2274.518 kb on - strand at 2274.518 kb on - strand at 2274.518 kb on - strand at 2274.531 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; liquid stress remove 2,269,916 + -0.7 2,269,917 - PS417_10640 0.19 +1.2 2,270,012 + PS417_10640 0.35 -0.7 2,270,012 + PS417_10640 0.35 -0.8 2,270,013 - PS417_10640 0.35 +0.0 2,270,262 - PS417_10640 0.76 -1.1 2,270,271 + -0.5 2,270,272 - PS417_10640 0.78 +0.1 2,270,360 + -0.7 2,270,360 + +0.3 2,270,360 + +0.4 2,270,361 - +0.4 2,270,361 - -0.3 2,270,457 - -2.7 2,270,477 + -0.6 2,270,478 - -3.3 2,270,520 + +0.3 2,270,520 + -4.1 2,270,538 + -2.9 2,270,538 + -0.5 2,270,539 - -0.1 2,270,710 + -2.5 2,270,758 + -0.8 2,270,761 - -1.6 2,271,072 + -3.5 2,271,621 + PS417_10645 0.29 -1.6 2,271,622 - PS417_10645 0.29 -4.7 2,272,056 + PS417_10645 0.45 -3.1 2,272,057 - PS417_10645 0.45 -6.1 2,272,059 + PS417_10645 0.46 -2.1 2,272,413 + PS417_10645 0.59 -1.3 2,272,413 + PS417_10645 0.59 -3.5 2,272,413 + PS417_10645 0.59 -3.1 2,272,413 + PS417_10645 0.59 -4.4 2,272,413 + PS417_10645 0.59 -3.1 2,272,413 + PS417_10645 0.59 -3.5 2,272,413 + -0.5 2,272,413 + -1.9 2,272,413 + PS417_10645 0.59 -4.0 2,272,413 + PS417_10645 0.59 -1.5 2,272,414 - PS417_10645 0.59 -5.0 2,272,414 - PS417_10645 0.59 -4.5 2,272,414 - -0.9 2,272,414 - PS417_10645 0.59 -3.0 2,272,414 - PS417_10645 0.59 -5.9 2,272,414 - PS417_10645 0.59 -1.3 2,272,415 + PS417_10645 0.59 -1.3 2,272,416 - PS417_10645 0.59 -4.6 2,272,926 + PS417_10645 0.78 -2.6 2,273,043 + PS417_10645 0.82 -3.7 2,273,043 + PS417_10645 0.82 -2.1 2,273,199 + PS417_10645 0.88 -1.2 2,273,199 + PS417_10645 0.88 -1.8 2,273,200 - -0.7 2,273,200 - PS417_10645 0.88 -4.4 2,273,410 - -2.4 2,273,439 + +0.2 2,273,446 + +0.6 2,273,472 + -0.9 2,273,472 + -0.8 2,273,473 - -2.2 2,273,505 + -0.2 2,273,505 + -1.4 2,273,505 + -1.2 2,273,505 + -1.0 2,273,505 + -2.0 2,273,505 + -1.3 2,273,505 + +0.9 2,273,506 - -4.1 2,273,513 + -1.8 2,273,530 - -3.1 2,273,547 + -3.5 2,273,547 + -3.3 2,273,548 - -3.6 2,273,548 - -4.3 2,273,767 + PS417_10650 0.31 -3.1 2,274,308 - -0.4 2,274,341 + +0.6 2,274,357 - -0.4 2,274,417 + -1.3 2,274,417 + -2.3 2,274,431 + -0.9 2,274,450 + +0.2 2,274,450 + -0.6 2,274,451 - -0.5 2,274,451 - +0.2 2,274,451 - -0.0 2,274,454 - -1.0 2,274,459 + +0.3 2,274,460 - +0.3 2,274,460 - -1.8 2,274,513 + -0.1 2,274,513 + -0.6 2,274,517 + -0.1 2,274,518 - -0.0 2,274,518 - -0.8 2,274,518 - +0.5 2,274,518 - +0.9 2,274,531 + -0.6
Or see this region's nucleotide sequence