Experiment: Fraxetin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_08970 and PS417_08975 are separated by 178 nucleotides PS417_08975 and PS417_08980 are separated by 11 nucleotides PS417_08980 and PS417_08985 are separated by 249 nucleotides
PS417_08970: PS417_08970 - chemotaxis protein, at 1,952,137 to 1,953,762
_08970
PS417_08975: PS417_08975 - 3-oxoacyl-ACP synthase, at 1,953,941 to 1,955,161
_08975
PS417_08980: PS417_08980 - 3-hydroxydecanoyl-ACP dehydratase, at 1,955,173 to 1,955,688
_08980
PS417_08985: PS417_08985 - histidine kinase, at 1,955,938 to 1,957,839
_08985
Position (kb)
1953
1954
1955
1956 Strain fitness (log2 ratio)
-1
0
1
2 at 1953.241 kb on + strand, within PS417_08970 at 1953.359 kb on + strand, within PS417_08970 at 1953.483 kb on + strand, within PS417_08970 at 1953.483 kb on + strand, within PS417_08970 at 1953.761 kb on - strand at 1953.821 kb on + strand at 1953.822 kb on - strand at 1953.873 kb on + strand at 1953.873 kb on + strand at 1953.942 kb on + strand at 1953.943 kb on - strand at 1953.943 kb on - strand at 1953.943 kb on - strand at 1953.946 kb on + strand at 1955.726 kb on - strand at 1955.774 kb on - strand at 1955.774 kb on - strand at 1955.780 kb on - strand at 1955.780 kb on - strand at 1955.780 kb on - strand at 1955.785 kb on - strand at 1955.785 kb on - strand at 1955.818 kb on - strand at 1955.999 kb on + strand at 1956.000 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; liquid stress remove 1,953,241 + PS417_08970 0.68 +0.1 1,953,359 + PS417_08970 0.75 -0.3 1,953,483 + PS417_08970 0.83 +0.3 1,953,483 + PS417_08970 0.83 -1.6 1,953,761 - -0.1 1,953,821 + -0.0 1,953,822 - -0.9 1,953,873 + -0.2 1,953,873 + -0.3 1,953,942 + +0.3 1,953,943 - -0.0 1,953,943 - -0.3 1,953,943 - -0.7 1,953,946 + -1.7 1,955,726 - -1.1 1,955,774 - -0.6 1,955,774 - -0.3 1,955,780 - +0.2 1,955,780 - +1.5 1,955,780 - -0.0 1,955,785 - +1.8 1,955,785 - +0.2 1,955,818 - -0.7 1,955,999 + -0.1 1,956,000 - +0.3
Or see this region's nucleotide sequence