Experiment: Fraxetin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00650 and PS417_00655 are separated by 102 nucleotides PS417_00655 and PS417_00660 are separated by 15 nucleotides
PS417_00650: PS417_00650 - LysR family transcriptional regulator, at 132,672 to 133,592
_00650
PS417_00655: PS417_00655 - DSBA oxidoreductase, at 133,695 to 135,230
_00655
PS417_00660: PS417_00660 - DSBA oxidoreductase, at 135,246 to 136,304
_00660
Position (kb) 133
134
135
136 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 133.242 kb on + strand, within PS417_00650 at 133.612 kb on + strand at 133.613 kb on - strand at 133.669 kb on + strand at 133.760 kb on - strand at 133.760 kb on - strand at 133.872 kb on + strand, within PS417_00655 at 133.872 kb on + strand, within PS417_00655 at 133.873 kb on - strand, within PS417_00655 at 133.876 kb on + strand, within PS417_00655 at 133.877 kb on - strand, within PS417_00655 at 133.877 kb on - strand, within PS417_00655 at 133.877 kb on - strand, within PS417_00655 at 133.877 kb on - strand, within PS417_00655 at 134.044 kb on - strand, within PS417_00655 at 134.044 kb on - strand, within PS417_00655 at 134.152 kb on - strand, within PS417_00655 at 134.218 kb on + strand, within PS417_00655 at 134.229 kb on + strand, within PS417_00655 at 134.230 kb on - strand, within PS417_00655 at 134.847 kb on + strand, within PS417_00655 at 134.847 kb on + strand, within PS417_00655 at 134.999 kb on + strand, within PS417_00655 at 135.141 kb on + strand at 135.142 kb on - strand at 135.144 kb on + strand at 135.144 kb on + strand at 135.145 kb on - strand at 135.309 kb on + strand at 135.310 kb on - strand at 135.310 kb on - strand at 135.518 kb on + strand, within PS417_00660 at 135.870 kb on + strand, within PS417_00660 at 135.871 kb on - strand, within PS417_00660 at 135.933 kb on + strand, within PS417_00660 at 135.933 kb on + strand, within PS417_00660 at 135.984 kb on + strand, within PS417_00660 at 135.985 kb on - strand, within PS417_00660 at 136.023 kb on - strand, within PS417_00660
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; liquid stress remove 133,242 + PS417_00650 0.62 -3.7 133,612 + -4.3 133,613 - -1.6 133,669 + -3.9 133,760 - -3.5 133,760 - -5.0 133,872 + PS417_00655 0.12 +1.0 133,872 + PS417_00655 0.12 -3.0 133,873 - PS417_00655 0.12 -2.2 133,876 + PS417_00655 0.12 -3.3 133,877 - PS417_00655 0.12 -4.4 133,877 - PS417_00655 0.12 -2.3 133,877 - PS417_00655 0.12 -4.7 133,877 - PS417_00655 0.12 -3.8 134,044 - PS417_00655 0.23 -1.0 134,044 - PS417_00655 0.23 -4.3 134,152 - PS417_00655 0.30 -0.3 134,218 + PS417_00655 0.34 -2.1 134,229 + PS417_00655 0.35 -3.8 134,230 - PS417_00655 0.35 -2.6 134,847 + PS417_00655 0.75 -4.8 134,847 + PS417_00655 0.75 -4.4 134,999 + PS417_00655 0.85 -3.1 135,141 + -1.1 135,142 - -2.2 135,144 + -5.5 135,144 + -4.9 135,145 - -3.7 135,309 + -4.4 135,310 - -5.0 135,310 - -0.2 135,518 + PS417_00660 0.26 -0.2 135,870 + PS417_00660 0.59 -1.8 135,871 - PS417_00660 0.59 -2.7 135,933 + PS417_00660 0.65 -3.5 135,933 + PS417_00660 0.65 -1.8 135,984 + PS417_00660 0.70 -1.6 135,985 - PS417_00660 0.70 -2.5 136,023 - PS417_00660 0.73 -2.8
Or see this region's nucleotide sequence