Experiment: Fraxetin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04285 and PS417_04290 are separated by 45 nucleotides PS417_04290 and PS417_04295 are separated by 108 nucleotides
PS417_04285: PS417_04285 - protease TldD, at 961,588 to 963,030
_04285
PS417_04290: PS417_04290 - hypothetical protein, at 963,076 to 963,597
_04290
PS417_04295: PS417_04295 - peptidase PmbA, at 963,706 to 965,052
_04295
Position (kb) 963
964 Strain fitness (log2 ratio) -1
0
1
2 at 962.228 kb on - strand, within PS417_04285 at 962.422 kb on + strand, within PS417_04285 at 962.575 kb on + strand, within PS417_04285 at 962.575 kb on + strand, within PS417_04285 at 962.576 kb on - strand, within PS417_04285 at 962.644 kb on + strand, within PS417_04285 at 962.680 kb on + strand, within PS417_04285 at 962.680 kb on + strand, within PS417_04285 at 962.680 kb on + strand, within PS417_04285 at 962.681 kb on - strand, within PS417_04285 at 962.681 kb on - strand, within PS417_04285 at 962.681 kb on - strand, within PS417_04285 at 962.681 kb on - strand, within PS417_04285 at 962.681 kb on - strand, within PS417_04285 at 962.681 kb on - strand, within PS417_04285 at 962.740 kb on + strand, within PS417_04285 at 962.741 kb on - strand, within PS417_04285 at 962.813 kb on - strand, within PS417_04285 at 962.938 kb on - strand at 962.938 kb on - strand at 963.029 kb on - strand at 963.116 kb on + strand at 963.116 kb on + strand at 963.129 kb on + strand, within PS417_04290 at 963.154 kb on - strand, within PS417_04290 at 963.288 kb on + strand, within PS417_04290 at 963.402 kb on + strand, within PS417_04290 at 963.501 kb on + strand, within PS417_04290 at 963.502 kb on - strand, within PS417_04290 at 963.585 kb on - strand at 963.910 kb on + strand, within PS417_04295 at 963.910 kb on + strand, within PS417_04295 at 963.910 kb on + strand, within PS417_04295 at 963.910 kb on + strand, within PS417_04295 at 963.911 kb on - strand, within PS417_04295 at 963.911 kb on - strand, within PS417_04295 at 964.213 kb on + strand, within PS417_04295 at 964.214 kb on - strand, within PS417_04295 at 964.243 kb on + strand, within PS417_04295 at 964.260 kb on + strand, within PS417_04295 at 964.312 kb on + strand, within PS417_04295 at 964.318 kb on + strand, within PS417_04295 at 964.319 kb on - strand, within PS417_04295 at 964.319 kb on - strand, within PS417_04295
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; liquid stress remove 962,228 - PS417_04285 0.44 +0.2 962,422 + PS417_04285 0.58 +0.8 962,575 + PS417_04285 0.68 +0.0 962,575 + PS417_04285 0.68 +0.4 962,576 - PS417_04285 0.68 +0.5 962,644 + PS417_04285 0.73 +0.3 962,680 + PS417_04285 0.76 -0.4 962,680 + PS417_04285 0.76 +1.6 962,680 + PS417_04285 0.76 -0.3 962,681 - PS417_04285 0.76 +0.1 962,681 - PS417_04285 0.76 +0.4 962,681 - PS417_04285 0.76 -0.6 962,681 - PS417_04285 0.76 +0.7 962,681 - PS417_04285 0.76 -0.9 962,681 - PS417_04285 0.76 +0.3 962,740 + PS417_04285 0.80 +0.2 962,741 - PS417_04285 0.80 -0.9 962,813 - PS417_04285 0.85 +0.1 962,938 - +1.6 962,938 - +0.0 963,029 - +0.1 963,116 + +0.7 963,116 + +2.2 963,129 + PS417_04290 0.10 +1.8 963,154 - PS417_04290 0.15 +0.2 963,288 + PS417_04290 0.41 +1.9 963,402 + PS417_04290 0.62 +0.9 963,501 + PS417_04290 0.81 +2.4 963,502 - PS417_04290 0.82 +0.9 963,585 - +1.2 963,910 + PS417_04295 0.15 -0.0 963,910 + PS417_04295 0.15 +0.8 963,910 + PS417_04295 0.15 -1.0 963,910 + PS417_04295 0.15 +0.1 963,911 - PS417_04295 0.15 -0.6 963,911 - PS417_04295 0.15 +0.2 964,213 + PS417_04295 0.38 +0.5 964,214 - PS417_04295 0.38 +0.0 964,243 + PS417_04295 0.40 -0.4 964,260 + PS417_04295 0.41 +0.1 964,312 + PS417_04295 0.45 +0.9 964,318 + PS417_04295 0.45 +0.8 964,319 - PS417_04295 0.46 +0.0 964,319 - PS417_04295 0.46 -0.7
Or see this region's nucleotide sequence