Experiment: Fraxetin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28075 and PS417_28080 are separated by 15 nucleotides PS417_28080 and PS417_28085 are separated by 132 nucleotides
PS417_28075: PS417_28075 - phosphate ABC transporter permease, at 6,057,413 to 6,059,083
_28075
PS417_28080: PS417_28080 - phosphate ABC transporter permease, at 6,059,099 to 6,061,384
_28080
PS417_28085: PS417_28085 - phosphate-binding protein, at 6,061,517 to 6,062,503
_28085
Position (kb)
6059
6060
6061
6062 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 6058.237 kb on - strand, within PS417_28075 at 6058.564 kb on + strand at 6058.659 kb on + strand, within PS417_28075 at 6058.891 kb on + strand, within PS417_28075 at 6058.892 kb on - strand, within PS417_28075 at 6058.917 kb on + strand at 6058.918 kb on - strand at 6059.091 kb on + strand at 6059.092 kb on - strand at 6059.100 kb on + strand at 6059.100 kb on + strand at 6059.502 kb on + strand, within PS417_28080 at 6059.502 kb on + strand, within PS417_28080 at 6059.502 kb on + strand, within PS417_28080 at 6059.502 kb on + strand, within PS417_28080 at 6059.503 kb on - strand, within PS417_28080 at 6059.503 kb on - strand, within PS417_28080 at 6059.503 kb on - strand, within PS417_28080 at 6059.503 kb on - strand, within PS417_28080 at 6059.503 kb on - strand, within PS417_28080 at 6059.503 kb on - strand, within PS417_28080 at 6059.565 kb on + strand, within PS417_28080 at 6059.643 kb on + strand, within PS417_28080 at 6059.644 kb on - strand, within PS417_28080 at 6059.644 kb on - strand, within PS417_28080 at 6059.938 kb on - strand, within PS417_28080 at 6060.073 kb on - strand, within PS417_28080 at 6060.073 kb on - strand, within PS417_28080 at 6060.073 kb on - strand, within PS417_28080 at 6060.073 kb on - strand, within PS417_28080 at 6060.073 kb on - strand at 6060.073 kb on - strand, within PS417_28080 at 6060.591 kb on + strand, within PS417_28080 at 6060.591 kb on + strand, within PS417_28080 at 6060.592 kb on - strand, within PS417_28080 at 6060.592 kb on - strand, within PS417_28080 at 6060.889 kb on + strand, within PS417_28080 at 6060.889 kb on + strand, within PS417_28080 at 6060.890 kb on - strand, within PS417_28080 at 6060.890 kb on - strand, within PS417_28080 at 6060.890 kb on - strand, within PS417_28080 at 6060.891 kb on + strand, within PS417_28080 at 6060.891 kb on + strand, within PS417_28080 at 6060.891 kb on + strand, within PS417_28080 at 6060.891 kb on + strand at 6060.891 kb on + strand, within PS417_28080 at 6060.892 kb on - strand at 6060.892 kb on - strand, within PS417_28080 at 6060.892 kb on - strand, within PS417_28080 at 6060.892 kb on - strand, within PS417_28080 at 6060.892 kb on - strand, within PS417_28080 at 6060.892 kb on - strand, within PS417_28080 at 6060.892 kb on - strand, within PS417_28080 at 6060.892 kb on - strand, within PS417_28080 at 6060.892 kb on - strand, within PS417_28080 at 6060.892 kb on - strand, within PS417_28080 at 6061.039 kb on + strand, within PS417_28080 at 6061.039 kb on + strand, within PS417_28080 at 6061.198 kb on - strand at 6061.260 kb on + strand at 6061.260 kb on + strand at 6061.260 kb on + strand at 6061.260 kb on + strand at 6061.261 kb on - strand at 6061.261 kb on - strand at 6061.584 kb on + strand at 6061.584 kb on + strand at 6061.714 kb on - strand, within PS417_28085 at 6061.714 kb on - strand, within PS417_28085 at 6061.806 kb on + strand, within PS417_28085 at 6061.806 kb on + strand, within PS417_28085 at 6061.900 kb on - strand, within PS417_28085 at 6061.900 kb on - strand, within PS417_28085 at 6061.900 kb on - strand, within PS417_28085 at 6061.932 kb on + strand, within PS417_28085 at 6061.932 kb on + strand, within PS417_28085 at 6061.933 kb on - strand, within PS417_28085 at 6061.939 kb on - strand, within PS417_28085 at 6061.939 kb on - strand, within PS417_28085 at 6062.163 kb on + strand, within PS417_28085 at 6062.163 kb on + strand, within PS417_28085 at 6062.164 kb on - strand, within PS417_28085
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; solid stress remove 6,058,237 - PS417_28075 0.49 -1.9 6,058,564 + -0.2 6,058,659 + PS417_28075 0.75 -5.7 6,058,891 + PS417_28075 0.88 -4.9 6,058,892 - PS417_28075 0.89 -4.5 6,058,917 + -1.8 6,058,918 - -3.7 6,059,091 + -1.5 6,059,092 - -0.6 6,059,100 + -1.0 6,059,100 + -4.2 6,059,502 + PS417_28080 0.18 -6.7 6,059,502 + PS417_28080 0.18 -6.2 6,059,502 + PS417_28080 0.18 -3.6 6,059,502 + PS417_28080 0.18 -5.8 6,059,503 - PS417_28080 0.18 -4.9 6,059,503 - PS417_28080 0.18 -1.2 6,059,503 - PS417_28080 0.18 -3.2 6,059,503 - PS417_28080 0.18 -2.4 6,059,503 - PS417_28080 0.18 -2.7 6,059,503 - PS417_28080 0.18 -5.6 6,059,565 + PS417_28080 0.20 -6.2 6,059,643 + PS417_28080 0.24 -4.9 6,059,644 - PS417_28080 0.24 -3.0 6,059,644 - PS417_28080 0.24 -3.5 6,059,938 - PS417_28080 0.37 -1.3 6,060,073 - PS417_28080 0.43 -3.9 6,060,073 - PS417_28080 0.43 -3.4 6,060,073 - PS417_28080 0.43 -1.7 6,060,073 - PS417_28080 0.43 -4.1 6,060,073 - -0.4 6,060,073 - PS417_28080 0.43 -4.5 6,060,591 + PS417_28080 0.65 -2.5 6,060,591 + PS417_28080 0.65 -4.1 6,060,592 - PS417_28080 0.65 -5.5 6,060,592 - PS417_28080 0.65 -1.2 6,060,889 + PS417_28080 0.78 -4.9 6,060,889 + PS417_28080 0.78 -5.2 6,060,890 - PS417_28080 0.78 -4.3 6,060,890 - PS417_28080 0.78 -2.9 6,060,890 - PS417_28080 0.78 -4.2 6,060,891 + PS417_28080 0.78 -5.9 6,060,891 + PS417_28080 0.78 -4.7 6,060,891 + PS417_28080 0.78 -2.1 6,060,891 + -0.4 6,060,891 + PS417_28080 0.78 -6.8 6,060,892 - -1.3 6,060,892 - PS417_28080 0.78 -2.1 6,060,892 - PS417_28080 0.78 -7.5 6,060,892 - PS417_28080 0.78 -5.8 6,060,892 - PS417_28080 0.78 -3.6 6,060,892 - PS417_28080 0.78 -5.1 6,060,892 - PS417_28080 0.78 -4.3 6,060,892 - PS417_28080 0.78 -6.8 6,060,892 - PS417_28080 0.78 -6.4 6,060,892 - PS417_28080 0.78 -5.2 6,061,039 + PS417_28080 0.85 -5.7 6,061,039 + PS417_28080 0.85 -5.6 6,061,198 - -4.2 6,061,260 + -0.6 6,061,260 + -2.4 6,061,260 + -6.7 6,061,260 + -4.3 6,061,261 - -4.1 6,061,261 - -4.6 6,061,584 + -3.0 6,061,584 + -3.2 6,061,714 - PS417_28085 0.20 -4.6 6,061,714 - PS417_28085 0.20 -2.9 6,061,806 + PS417_28085 0.29 -4.1 6,061,806 + PS417_28085 0.29 -4.0 6,061,900 - PS417_28085 0.39 -5.2 6,061,900 - PS417_28085 0.39 -7.2 6,061,900 - PS417_28085 0.39 -5.7 6,061,932 + PS417_28085 0.42 -5.9 6,061,932 + PS417_28085 0.42 -1.1 6,061,933 - PS417_28085 0.42 -5.0 6,061,939 - PS417_28085 0.43 -5.3 6,061,939 - PS417_28085 0.43 -5.7 6,062,163 + PS417_28085 0.65 -4.4 6,062,163 + PS417_28085 0.65 -3.5 6,062,164 - PS417_28085 0.66 -1.8
Or see this region's nucleotide sequence