Experiment: Fraxetin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19915 and PS417_19920 are separated by 137 nucleotides PS417_19920 and PS417_19925 are separated by 99 nucleotides
PS417_19915: PS417_19915 - serine/threonine protein phosphatase, at 4,324,703 to 4,325,512
_19915
PS417_19920: PS417_19920 - AraC family transcriptional regulator, at 4,325,650 to 4,326,399
_19920
PS417_19925: PS417_19925 - membrane protein, at 4,326,499 to 4,327,383
_19925
Position (kb)
4325
4326
4327 Strain fitness (log2 ratio)
-1
0
1 at 4324.765 kb on - strand at 4324.836 kb on + strand, within PS417_19915 at 4324.837 kb on - strand, within PS417_19915 at 4324.984 kb on - strand, within PS417_19915 at 4325.001 kb on + strand, within PS417_19915 at 4325.002 kb on - strand, within PS417_19915 at 4325.007 kb on + strand, within PS417_19915 at 4325.064 kb on + strand, within PS417_19915 at 4325.250 kb on + strand, within PS417_19915 at 4325.250 kb on + strand, within PS417_19915 at 4325.250 kb on + strand, within PS417_19915 at 4325.250 kb on + strand, within PS417_19915 at 4325.250 kb on + strand, within PS417_19915 at 4325.250 kb on + strand, within PS417_19915 at 4325.251 kb on - strand, within PS417_19915 at 4325.251 kb on - strand, within PS417_19915 at 4325.322 kb on + strand, within PS417_19915 at 4325.322 kb on + strand, within PS417_19915 at 4325.322 kb on + strand, within PS417_19915 at 4325.322 kb on + strand at 4325.323 kb on - strand, within PS417_19915 at 4325.323 kb on - strand, within PS417_19915 at 4325.560 kb on + strand at 4325.561 kb on - strand at 4325.565 kb on + strand at 4325.565 kb on + strand at 4325.619 kb on - strand at 4325.619 kb on - strand at 4325.670 kb on - strand at 4325.677 kb on + strand at 4325.677 kb on + strand at 4325.677 kb on + strand at 4325.678 kb on - strand at 4326.038 kb on + strand, within PS417_19920 at 4326.232 kb on + strand, within PS417_19920 at 4326.232 kb on + strand, within PS417_19920 at 4326.232 kb on + strand, within PS417_19920 at 4326.233 kb on - strand, within PS417_19920 at 4326.233 kb on - strand, within PS417_19920 at 4326.233 kb on - strand, within PS417_19920 at 4326.233 kb on - strand, within PS417_19920 at 4326.234 kb on + strand, within PS417_19920 at 4326.319 kb on + strand, within PS417_19920 at 4326.321 kb on + strand, within PS417_19920 at 4326.321 kb on + strand, within PS417_19920 at 4326.322 kb on - strand, within PS417_19920 at 4326.322 kb on - strand, within PS417_19920 at 4326.322 kb on - strand, within PS417_19920 at 4326.446 kb on - strand at 4326.484 kb on + strand at 4326.485 kb on - strand at 4326.532 kb on - strand at 4326.704 kb on + strand, within PS417_19925 at 4327.386 kb on + strand at 4327.389 kb on - strand at 4327.393 kb on + strand at 4327.393 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; solid stress remove 4,324,765 - +1.0 4,324,836 + PS417_19915 0.16 -1.1 4,324,837 - PS417_19915 0.17 -0.5 4,324,984 - PS417_19915 0.35 +0.2 4,325,001 + PS417_19915 0.37 +0.4 4,325,002 - PS417_19915 0.37 -1.0 4,325,007 + PS417_19915 0.38 +0.4 4,325,064 + PS417_19915 0.45 -0.3 4,325,250 + PS417_19915 0.68 +0.6 4,325,250 + PS417_19915 0.68 +0.0 4,325,250 + PS417_19915 0.68 +0.2 4,325,250 + PS417_19915 0.68 +0.8 4,325,250 + PS417_19915 0.68 -0.0 4,325,250 + PS417_19915 0.68 +0.0 4,325,251 - PS417_19915 0.68 +0.1 4,325,251 - PS417_19915 0.68 -0.1 4,325,322 + PS417_19915 0.76 -0.2 4,325,322 + PS417_19915 0.76 -0.7 4,325,322 + PS417_19915 0.76 -0.1 4,325,322 + -1.0 4,325,323 - PS417_19915 0.77 -1.3 4,325,323 - PS417_19915 0.77 +0.3 4,325,560 + +0.3 4,325,561 - -0.2 4,325,565 + +0.1 4,325,565 + -1.0 4,325,619 - +0.2 4,325,619 - -0.3 4,325,670 - +0.7 4,325,677 + +0.1 4,325,677 + +0.5 4,325,677 + +0.6 4,325,678 - +0.0 4,326,038 + PS417_19920 0.52 +0.4 4,326,232 + PS417_19920 0.78 -0.0 4,326,232 + PS417_19920 0.78 -0.3 4,326,232 + PS417_19920 0.78 +0.1 4,326,233 - PS417_19920 0.78 -0.1 4,326,233 - PS417_19920 0.78 +0.3 4,326,233 - PS417_19920 0.78 -1.7 4,326,233 - PS417_19920 0.78 +0.4 4,326,234 + PS417_19920 0.78 -0.2 4,326,319 + PS417_19920 0.89 -0.4 4,326,321 + PS417_19920 0.89 -1.1 4,326,321 + PS417_19920 0.89 -0.0 4,326,322 - PS417_19920 0.90 -0.1 4,326,322 - PS417_19920 0.90 -0.2 4,326,322 - PS417_19920 0.90 -0.3 4,326,446 - +0.5 4,326,484 + -0.3 4,326,485 - +0.2 4,326,532 - -0.3 4,326,704 + PS417_19925 0.23 -0.2 4,327,386 + -0.4 4,327,389 - -0.0 4,327,393 + -0.2 4,327,393 + +0.0
Or see this region's nucleotide sequence