Experiment: Fraxetin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15795 and PS417_15800 are separated by 164 nucleotides PS417_15800 and PS417_15805 overlap by 1 nucleotides PS417_15805 and PS417_15810 are separated by 71 nucleotides PS417_15810 and PS417_15815 are separated by 125 nucleotides
PS417_15795: PS417_15795 - hypothetical protein, at 3,462,293 to 3,462,676
_15795
PS417_15800: PS417_15800 - photosynthetic protein synthase I, at 3,462,841 to 3,463,449
_15800
PS417_15805: PS417_15805 - transporter, at 3,463,449 to 3,463,916
_15805
PS417_15810: PS417_15810 - hypothetical protein, at 3,463,988 to 3,464,317
_15810
PS417_15815: PS417_15815 - hydrolase, at 3,464,443 to 3,464,952
_15815
Position (kb)
3463
3464 Strain fitness (log2 ratio)
-2
-1
0
1 at 3462.466 kb on - strand, within PS417_15795 at 3462.630 kb on + strand, within PS417_15795 at 3462.689 kb on - strand at 3462.749 kb on - strand at 3462.749 kb on - strand at 3462.771 kb on - strand at 3462.846 kb on + strand at 3462.846 kb on + strand at 3462.947 kb on - strand, within PS417_15800 at 3462.947 kb on - strand, within PS417_15800 at 3462.982 kb on - strand, within PS417_15800 at 3463.030 kb on + strand, within PS417_15800 at 3463.207 kb on + strand, within PS417_15800 at 3463.207 kb on + strand, within PS417_15800 at 3463.208 kb on - strand, within PS417_15800 at 3463.321 kb on + strand, within PS417_15800 at 3463.322 kb on - strand, within PS417_15800 at 3463.322 kb on - strand, within PS417_15800 at 3463.322 kb on - strand, within PS417_15800 at 3463.322 kb on - strand, within PS417_15800 at 3463.476 kb on - strand at 3463.482 kb on - strand at 3463.758 kb on + strand, within PS417_15805 at 3463.979 kb on + strand at 3463.981 kb on + strand at 3464.141 kb on - strand, within PS417_15810 at 3464.173 kb on - strand, within PS417_15810 at 3464.184 kb on + strand, within PS417_15810 at 3464.217 kb on + strand, within PS417_15810 at 3464.217 kb on + strand at 3464.218 kb on - strand, within PS417_15810 at 3464.231 kb on + strand at 3464.257 kb on - strand, within PS417_15810 at 3464.656 kb on + strand, within PS417_15815 at 3464.656 kb on + strand, within PS417_15815 at 3464.657 kb on - strand, within PS417_15815 at 3464.657 kb on - strand, within PS417_15815 at 3464.657 kb on - strand, within PS417_15815 at 3464.658 kb on + strand, within PS417_15815 at 3464.659 kb on - strand, within PS417_15815
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; solid stress remove 3,462,466 - PS417_15795 0.45 -1.3 3,462,630 + PS417_15795 0.88 -0.6 3,462,689 - -0.3 3,462,749 - +0.3 3,462,749 - -1.9 3,462,771 - -1.5 3,462,846 + -2.1 3,462,846 + -1.2 3,462,947 - PS417_15800 0.17 -2.5 3,462,947 - PS417_15800 0.17 -0.9 3,462,982 - PS417_15800 0.23 -2.5 3,463,030 + PS417_15800 0.31 -0.5 3,463,207 + PS417_15800 0.60 -1.5 3,463,207 + PS417_15800 0.60 -2.3 3,463,208 - PS417_15800 0.60 -2.0 3,463,321 + PS417_15800 0.79 -1.4 3,463,322 - PS417_15800 0.79 -2.6 3,463,322 - PS417_15800 0.79 -0.6 3,463,322 - PS417_15800 0.79 -1.9 3,463,322 - PS417_15800 0.79 +1.2 3,463,476 - -1.6 3,463,482 - -0.9 3,463,758 + PS417_15805 0.66 -1.1 3,463,979 + +0.6 3,463,981 + -0.2 3,464,141 - PS417_15810 0.46 -0.1 3,464,173 - PS417_15810 0.56 -0.1 3,464,184 + PS417_15810 0.59 -0.7 3,464,217 + PS417_15810 0.69 -0.4 3,464,217 + +0.7 3,464,218 - PS417_15810 0.70 +0.0 3,464,231 + -0.7 3,464,257 - PS417_15810 0.82 +0.1 3,464,656 + PS417_15815 0.42 -2.4 3,464,656 + PS417_15815 0.42 -0.1 3,464,657 - PS417_15815 0.42 -0.4 3,464,657 - PS417_15815 0.42 -0.1 3,464,657 - PS417_15815 0.42 -0.1 3,464,658 + PS417_15815 0.42 -0.5 3,464,659 - PS417_15815 0.42 +0.3
Or see this region's nucleotide sequence