Experiment: Fraxetin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06315 and PS417_06320 overlap by 4 nucleotides PS417_06320 and PS417_06325 are separated by 129 nucleotides PS417_06325 and PS417_06330 are separated by 109 nucleotides
PS417_06315: PS417_06315 - cell division protein FtsB, at 1,403,981 to 1,404,259
_06315
PS417_06320: PS417_06320 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,404,256 to 1,404,963
_06320
PS417_06325: PS417_06325 - LysR family transcriptional regulator, at 1,405,093 to 1,405,989
_06325
PS417_06330: PS417_06330 - S-(hydroxymethyl)glutathione dehydrogenase, at 1,406,099 to 1,407,211
_06330
Position (kb)
1405
1406 Strain fitness (log2 ratio)
-2
-1
0
1 at 1405.127 kb on - strand at 1405.184 kb on + strand, within PS417_06325 at 1405.268 kb on + strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.272 kb on - strand, within PS417_06325 at 1405.422 kb on + strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.447 kb on - strand, within PS417_06325 at 1405.472 kb on + strand, within PS417_06325 at 1405.493 kb on + strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1406.122 kb on - strand at 1406.122 kb on - strand at 1406.234 kb on + strand, within PS417_06330 at 1406.236 kb on + strand, within PS417_06330 at 1406.363 kb on + strand at 1406.480 kb on + strand, within PS417_06330 at 1406.504 kb on + strand, within PS417_06330 at 1406.570 kb on - strand, within PS417_06330
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; solid stress remove 1,405,127 - -1.5 1,405,184 + PS417_06325 0.10 -0.2 1,405,268 + PS417_06325 0.20 -2.2 1,405,269 - PS417_06325 0.20 -0.3 1,405,269 - PS417_06325 0.20 -2.0 1,405,269 - PS417_06325 0.20 -1.6 1,405,271 + PS417_06325 0.20 -0.9 1,405,271 + PS417_06325 0.20 +0.5 1,405,272 - PS417_06325 0.20 -1.2 1,405,422 + PS417_06325 0.37 -0.7 1,405,423 - PS417_06325 0.37 -0.5 1,405,423 - PS417_06325 0.37 -0.8 1,405,446 + PS417_06325 0.39 -0.3 1,405,446 + PS417_06325 0.39 +0.1 1,405,447 - PS417_06325 0.39 -1.7 1,405,472 + PS417_06325 0.42 -0.4 1,405,493 + PS417_06325 0.45 -0.8 1,405,494 - PS417_06325 0.45 -1.1 1,405,494 - PS417_06325 0.45 -1.0 1,405,494 - PS417_06325 0.45 +0.7 1,406,122 - -1.2 1,406,122 - -0.9 1,406,234 + PS417_06330 0.12 -1.8 1,406,236 + PS417_06330 0.12 -0.2 1,406,363 + +0.5 1,406,480 + PS417_06330 0.34 -2.2 1,406,504 + PS417_06330 0.36 -0.8 1,406,570 - PS417_06330 0.42 -1.3
Or see this region's nucleotide sequence