Experiment: Fraxetin 1 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22695 and PS417_22700 are separated by 196 nucleotides PS417_22700 and PS417_22705 are separated by 74 nucleotides PS417_22705 and PS417_22710 are separated by 115 nucleotides
PS417_22695: PS417_22695 - glyceraldehyde-3-phosphate dehydrogenase, at 4,915,330 to 4,916,331
_22695
PS417_22700: PS417_22700 - RNA polymerase subunit sigma-24, at 4,916,528 to 4,917,046
_22700
PS417_22705: PS417_22705 - glycerol-3-phosphate ABC transporter substrate-binding protein, at 4,917,121 to 4,918,089
_22705
PS417_22710: PS417_22710 - TonB-dependent receptor, at 4,918,205 to 4,920,769
_22710
Position (kb)
4917
4918
4919 Strain fitness (log2 ratio)
-1
0
1 at 4916.152 kb on + strand, within PS417_22695 at 4916.155 kb on - strand, within PS417_22695 at 4916.155 kb on - strand, within PS417_22695 at 4916.263 kb on + strand at 4916.293 kb on - strand at 4916.293 kb on - strand at 4916.301 kb on + strand at 4916.329 kb on + strand at 4916.330 kb on - strand at 4916.643 kb on - strand, within PS417_22700 at 4916.702 kb on + strand, within PS417_22700 at 4917.008 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.092 kb on + strand at 4917.092 kb on + strand at 4917.326 kb on + strand, within PS417_22705 at 4917.531 kb on - strand, within PS417_22705 at 4917.531 kb on - strand, within PS417_22705 at 4917.994 kb on + strand at 4918.125 kb on - strand at 4918.125 kb on - strand at 4918.176 kb on + strand at 4918.176 kb on + strand at 4918.177 kb on - strand at 4918.177 kb on - strand at 4918.177 kb on - strand at 4918.178 kb on + strand at 4918.179 kb on - strand at 4918.179 kb on - strand at 4918.334 kb on + strand at 4918.335 kb on - strand at 4918.452 kb on + strand at 4918.684 kb on + strand, within PS417_22710 at 4918.685 kb on - strand, within PS417_22710 at 4918.701 kb on + strand, within PS417_22710 at 4918.701 kb on + strand, within PS417_22710 at 4918.760 kb on + strand, within PS417_22710 at 4918.865 kb on + strand, within PS417_22710 at 4918.865 kb on + strand, within PS417_22710 at 4918.925 kb on + strand, within PS417_22710
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; solid stress remove 4,916,152 + PS417_22695 0.82 -0.2 4,916,155 - PS417_22695 0.82 -1.5 4,916,155 - PS417_22695 0.82 -0.3 4,916,263 + -0.2 4,916,293 - -1.2 4,916,293 - -0.1 4,916,301 + -0.3 4,916,329 + +0.0 4,916,330 - +0.0 4,916,643 - PS417_22700 0.22 -0.2 4,916,702 + PS417_22700 0.34 -0.3 4,917,008 - +1.3 4,917,016 - +0.4 4,917,016 - +1.3 4,917,016 - +0.3 4,917,016 - -0.0 4,917,016 - +0.1 4,917,092 + +0.6 4,917,092 + +0.2 4,917,326 + PS417_22705 0.21 -0.5 4,917,531 - PS417_22705 0.42 -0.9 4,917,531 - PS417_22705 0.42 -0.8 4,917,994 + -0.7 4,918,125 - -0.3 4,918,125 - -0.1 4,918,176 + +0.0 4,918,176 + -0.1 4,918,177 - -0.0 4,918,177 - -0.7 4,918,177 - +0.9 4,918,178 + -0.1 4,918,179 - +0.8 4,918,179 - +0.1 4,918,334 + -0.5 4,918,335 - -0.3 4,918,452 + -0.3 4,918,684 + PS417_22710 0.19 -0.4 4,918,685 - PS417_22710 0.19 -0.5 4,918,701 + PS417_22710 0.19 -0.1 4,918,701 + PS417_22710 0.19 -0.1 4,918,760 + PS417_22710 0.22 -0.4 4,918,865 + PS417_22710 0.26 +0.1 4,918,865 + PS417_22710 0.26 -1.6 4,918,925 + PS417_22710 0.28 -0.4
Or see this region's nucleotide sequence