Experiment: Fraxetin 1 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22540 and PS417_22545 are separated by 305 nucleotides PS417_22545 and PS417_22550 are separated by 4 nucleotides PS417_22550 and PS417_22555 are separated by 204 nucleotides
PS417_22540: PS417_22540 - preprotein translocase subunit SecA, at 4,878,970 to 4,881,705
_22540
PS417_22545: PS417_22545 - hypothetical protein, at 4,882,011 to 4,882,466
_22545
PS417_22550: PS417_22550 - ATP-binding protein, at 4,882,471 to 4,883,949
_22550
PS417_22555: PS417_22555 - chemotaxis protein, at 4,884,154 to 4,886,043
_22555
Position (kb)
4882
4883
4884 Strain fitness (log2 ratio)
-1
0
1 at 4881.728 kb on - strand at 4881.906 kb on - strand at 4881.911 kb on - strand at 4881.930 kb on - strand at 4881.993 kb on + strand at 4881.997 kb on + strand at 4881.998 kb on - strand at 4881.998 kb on - strand at 4882.956 kb on + strand, within PS417_22550 at 4882.956 kb on + strand, within PS417_22550 at 4882.959 kb on + strand, within PS417_22550 at 4882.959 kb on + strand, within PS417_22550 at 4883.045 kb on + strand, within PS417_22550 at 4883.129 kb on - strand, within PS417_22550 at 4883.234 kb on + strand, within PS417_22550 at 4883.613 kb on + strand, within PS417_22550 at 4883.973 kb on - strand at 4884.024 kb on - strand at 4884.032 kb on + strand at 4884.033 kb on - strand at 4884.033 kb on - strand at 4884.069 kb on + strand at 4884.128 kb on + strand at 4884.128 kb on + strand at 4884.128 kb on + strand at 4884.160 kb on - strand at 4884.238 kb on + strand at 4884.287 kb on - strand at 4884.347 kb on + strand, within PS417_22555 at 4884.348 kb on - strand, within PS417_22555 at 4884.538 kb on + strand, within PS417_22555 at 4884.539 kb on - strand, within PS417_22555 at 4884.539 kb on - strand, within PS417_22555 at 4884.583 kb on + strand, within PS417_22555 at 4884.584 kb on - strand, within PS417_22555 at 4884.584 kb on - strand, within PS417_22555 at 4884.584 kb on - strand, within PS417_22555 at 4884.584 kb on - strand, within PS417_22555 at 4884.586 kb on - strand, within PS417_22555 at 4884.586 kb on - strand, within PS417_22555 at 4884.660 kb on - strand, within PS417_22555 at 4884.730 kb on + strand, within PS417_22555 at 4884.767 kb on + strand, within PS417_22555 at 4884.809 kb on + strand, within PS417_22555 at 4884.809 kb on + strand, within PS417_22555 at 4884.809 kb on + strand, within PS417_22555 at 4884.810 kb on - strand, within PS417_22555 at 4884.877 kb on - strand, within PS417_22555 at 4884.890 kb on + strand, within PS417_22555
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; solid stress remove 4,881,728 - +0.1 4,881,906 - -0.6 4,881,911 - -0.2 4,881,930 - -0.2 4,881,993 + -1.4 4,881,997 + +0.1 4,881,998 - -1.1 4,881,998 - -0.9 4,882,956 + PS417_22550 0.33 -0.4 4,882,956 + PS417_22550 0.33 -1.0 4,882,959 + PS417_22550 0.33 -0.1 4,882,959 + PS417_22550 0.33 -0.2 4,883,045 + PS417_22550 0.39 -0.1 4,883,129 - PS417_22550 0.44 +0.2 4,883,234 + PS417_22550 0.52 +0.2 4,883,613 + PS417_22550 0.77 +0.9 4,883,973 - +0.3 4,884,024 - +0.2 4,884,032 + -0.1 4,884,033 - -0.7 4,884,033 - -1.2 4,884,069 + +0.7 4,884,128 + +0.9 4,884,128 + +0.0 4,884,128 + -0.0 4,884,160 - +0.2 4,884,238 + +0.2 4,884,287 - -0.1 4,884,347 + PS417_22555 0.10 +0.1 4,884,348 - PS417_22555 0.10 -0.8 4,884,538 + PS417_22555 0.20 -0.3 4,884,539 - PS417_22555 0.20 -0.2 4,884,539 - PS417_22555 0.20 -0.3 4,884,583 + PS417_22555 0.23 -0.1 4,884,584 - PS417_22555 0.23 -0.3 4,884,584 - PS417_22555 0.23 -0.4 4,884,584 - PS417_22555 0.23 +0.0 4,884,584 - PS417_22555 0.23 -0.7 4,884,586 - PS417_22555 0.23 +1.3 4,884,586 - PS417_22555 0.23 -1.1 4,884,660 - PS417_22555 0.27 -0.5 4,884,730 + PS417_22555 0.30 +0.3 4,884,767 + PS417_22555 0.32 +0.1 4,884,809 + PS417_22555 0.35 +0.3 4,884,809 + PS417_22555 0.35 +0.1 4,884,809 + PS417_22555 0.35 -0.2 4,884,810 - PS417_22555 0.35 -0.1 4,884,877 - PS417_22555 0.38 -0.3 4,884,890 + PS417_22555 0.39 -0.1
Or see this region's nucleotide sequence