Experiment: Fraxetin 1 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14030 and PS417_14035 are separated by 196 nucleotides PS417_14035 and PS417_14040 are separated by 49 nucleotides PS417_14040 and PS417_14045 are separated by 127 nucleotides PS417_14045 and PS417_14050 are separated by 143 nucleotides
PS417_14030: PS417_14030 - hypothetical protein, at 3,082,197 to 3,082,733
_14030
PS417_14035: PS417_14035 - lactoylglutathione lyase, at 3,082,930 to 3,083,451
_14035
PS417_14040: PS417_14040 - alkyl hydroperoxide reductase, at 3,083,501 to 3,085,066
_14040
PS417_14045: PS417_14045 - alkyl hydroperoxide reductase, at 3,085,194 to 3,085,757
_14045
PS417_14050: PS417_14050 - recombinase, at 3,085,901 to 3,086,827
_14050
Position (kb)
3083
3084
3085
3086 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3082.719 kb on - strand at 3083.053 kb on + strand, within PS417_14035 at 3083.053 kb on + strand, within PS417_14035 at 3083.120 kb on - strand, within PS417_14035 at 3083.173 kb on - strand, within PS417_14035 at 3083.262 kb on + strand at 3083.265 kb on + strand, within PS417_14035 at 3083.296 kb on - strand, within PS417_14035 at 3083.296 kb on - strand, within PS417_14035 at 3083.430 kb on + strand at 3083.503 kb on - strand at 3083.589 kb on + strand at 3083.738 kb on - strand, within PS417_14040 at 3083.784 kb on + strand, within PS417_14040 at 3083.785 kb on - strand at 3083.868 kb on + strand, within PS417_14040 at 3083.868 kb on + strand, within PS417_14040 at 3083.868 kb on + strand, within PS417_14040 at 3084.060 kb on + strand, within PS417_14040 at 3084.061 kb on - strand, within PS417_14040 at 3084.061 kb on - strand, within PS417_14040 at 3084.061 kb on - strand, within PS417_14040 at 3084.239 kb on + strand at 3084.240 kb on - strand at 3084.240 kb on - strand, within PS417_14040 at 3084.370 kb on + strand, within PS417_14040 at 3084.382 kb on - strand, within PS417_14040 at 3084.700 kb on - strand, within PS417_14040 at 3084.700 kb on - strand, within PS417_14040 at 3085.030 kb on - strand at 3085.048 kb on + strand at 3085.048 kb on + strand at 3085.049 kb on - strand at 3085.067 kb on - strand at 3085.094 kb on - strand at 3085.156 kb on - strand at 3085.232 kb on + strand at 3085.233 kb on - strand at 3085.289 kb on - strand, within PS417_14045 at 3085.289 kb on - strand, within PS417_14045 at 3085.394 kb on + strand, within PS417_14045 at 3085.477 kb on + strand at 3085.478 kb on - strand, within PS417_14045 at 3085.585 kb on + strand, within PS417_14045 at 3085.585 kb on + strand, within PS417_14045 at 3085.643 kb on - strand, within PS417_14045 at 3085.693 kb on - strand, within PS417_14045 at 3085.711 kb on + strand at 3085.734 kb on + strand at 3085.781 kb on + strand at 3085.782 kb on - strand at 3085.791 kb on + strand at 3085.888 kb on - strand at 3085.992 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; solid stress remove 3,082,719 - +2.0 3,083,053 + PS417_14035 0.24 -0.2 3,083,053 + PS417_14035 0.24 -0.3 3,083,120 - PS417_14035 0.36 -1.1 3,083,173 - PS417_14035 0.47 -0.3 3,083,262 + +0.4 3,083,265 + PS417_14035 0.64 -0.2 3,083,296 - PS417_14035 0.70 -0.4 3,083,296 - PS417_14035 0.70 -0.2 3,083,430 + -0.1 3,083,503 - -0.3 3,083,589 + -0.5 3,083,738 - PS417_14040 0.15 +0.0 3,083,784 + PS417_14040 0.18 -0.5 3,083,785 - -0.6 3,083,868 + PS417_14040 0.23 +0.8 3,083,868 + PS417_14040 0.23 -2.1 3,083,868 + PS417_14040 0.23 -0.6 3,084,060 + PS417_14040 0.36 -1.0 3,084,061 - PS417_14040 0.36 -0.3 3,084,061 - PS417_14040 0.36 -1.3 3,084,061 - PS417_14040 0.36 -0.2 3,084,239 + -0.4 3,084,240 - -0.4 3,084,240 - PS417_14040 0.47 -0.3 3,084,370 + PS417_14040 0.55 -0.4 3,084,382 - PS417_14040 0.56 -0.8 3,084,700 - PS417_14040 0.77 -0.9 3,084,700 - PS417_14040 0.77 -1.2 3,085,030 - -0.7 3,085,048 + -0.6 3,085,048 + -0.5 3,085,049 - -0.7 3,085,067 - -1.2 3,085,094 - +0.3 3,085,156 - -0.4 3,085,232 + -1.3 3,085,233 - -0.9 3,085,289 - PS417_14045 0.17 -1.2 3,085,289 - PS417_14045 0.17 -2.7 3,085,394 + PS417_14045 0.35 -1.2 3,085,477 + -1.1 3,085,478 - PS417_14045 0.50 -0.4 3,085,585 + PS417_14045 0.69 -2.7 3,085,585 + PS417_14045 0.69 +0.1 3,085,643 - PS417_14045 0.80 -0.8 3,085,693 - PS417_14045 0.88 -1.7 3,085,711 + -1.3 3,085,734 + -0.7 3,085,781 + -1.9 3,085,782 - +0.2 3,085,791 + -1.6 3,085,888 - -0.4 3,085,992 + -0.7
Or see this region's nucleotide sequence