Experiment: Fraxetin 1 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11495 and PS417_11500 are separated by 9 nucleotides PS417_11500 and PS417_11505 are separated by 14 nucleotides
PS417_11495: PS417_11495 - oxidoreductase, at 2,472,150 to 2,473,109
_11495
PS417_11500: PS417_11500 - hypothetical protein, at 2,473,119 to 2,474,147
_11500
PS417_11505: PS417_11505 - ion channel protein Tsx, at 2,474,162 to 2,475,109
_11505
Position (kb)
2473
2474
2475 Strain fitness (log2 ratio)
-1
0
1 at 2472.441 kb on + strand, within PS417_11495 at 2472.686 kb on - strand, within PS417_11495 at 2472.873 kb on + strand, within PS417_11495 at 2472.874 kb on - strand, within PS417_11495 at 2472.874 kb on - strand, within PS417_11495 at 2472.877 kb on + strand at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.878 kb on - strand, within PS417_11495 at 2472.942 kb on + strand, within PS417_11495 at 2472.943 kb on - strand, within PS417_11495 at 2473.060 kb on - strand at 2473.060 kb on - strand at 2473.060 kb on - strand at 2473.363 kb on + strand, within PS417_11500 at 2473.363 kb on + strand, within PS417_11500 at 2473.363 kb on + strand, within PS417_11500 at 2473.364 kb on - strand, within PS417_11500 at 2473.364 kb on - strand, within PS417_11500 at 2473.364 kb on - strand, within PS417_11500 at 2473.834 kb on + strand, within PS417_11500 at 2474.149 kb on + strand at 2474.150 kb on - strand at 2474.188 kb on - strand at 2474.278 kb on - strand, within PS417_11505 at 2474.412 kb on + strand, within PS417_11505 at 2474.457 kb on + strand, within PS417_11505 at 2474.457 kb on + strand, within PS417_11505 at 2474.458 kb on - strand, within PS417_11505 at 2474.634 kb on + strand, within PS417_11505 at 2474.655 kb on + strand, within PS417_11505 at 2474.714 kb on - strand at 2474.770 kb on + strand, within PS417_11505 at 2474.808 kb on + strand, within PS417_11505 at 2474.845 kb on - strand, within PS417_11505 at 2474.859 kb on + strand, within PS417_11505 at 2474.859 kb on + strand at 2474.890 kb on + strand, within PS417_11505 at 2474.906 kb on + strand, within PS417_11505 at 2474.943 kb on + strand, within PS417_11505 at 2474.943 kb on + strand, within PS417_11505 at 2474.943 kb on + strand, within PS417_11505
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; solid stress remove 2,472,441 + PS417_11495 0.30 -1.7 2,472,686 - PS417_11495 0.56 +0.1 2,472,873 + PS417_11495 0.75 -0.3 2,472,874 - PS417_11495 0.75 -0.1 2,472,874 - PS417_11495 0.75 -0.1 2,472,877 + -0.3 2,472,877 + PS417_11495 0.76 +0.2 2,472,877 + PS417_11495 0.76 -0.4 2,472,877 + PS417_11495 0.76 -0.2 2,472,877 + PS417_11495 0.76 -1.1 2,472,877 + PS417_11495 0.76 -0.2 2,472,877 + PS417_11495 0.76 -0.3 2,472,877 + PS417_11495 0.76 +0.2 2,472,878 - PS417_11495 0.76 +0.1 2,472,942 + PS417_11495 0.82 -0.8 2,472,943 - PS417_11495 0.83 +0.0 2,473,060 - +0.7 2,473,060 - -0.2 2,473,060 - +0.3 2,473,363 + PS417_11500 0.24 +0.1 2,473,363 + PS417_11500 0.24 +0.2 2,473,363 + PS417_11500 0.24 +1.0 2,473,364 - PS417_11500 0.24 +0.7 2,473,364 - PS417_11500 0.24 +0.5 2,473,364 - PS417_11500 0.24 +0.0 2,473,834 + PS417_11500 0.69 +0.1 2,474,149 + +0.3 2,474,150 - -0.7 2,474,188 - -0.7 2,474,278 - PS417_11505 0.12 -0.3 2,474,412 + PS417_11505 0.26 +0.2 2,474,457 + PS417_11505 0.31 -1.2 2,474,457 + PS417_11505 0.31 +0.7 2,474,458 - PS417_11505 0.31 +0.1 2,474,634 + PS417_11505 0.50 +0.7 2,474,655 + PS417_11505 0.52 -0.1 2,474,714 - +1.5 2,474,770 + PS417_11505 0.64 -0.2 2,474,808 + PS417_11505 0.68 -0.4 2,474,845 - PS417_11505 0.72 +0.4 2,474,859 + PS417_11505 0.74 +0.4 2,474,859 + +1.6 2,474,890 + PS417_11505 0.77 -0.4 2,474,906 + PS417_11505 0.78 -0.5 2,474,943 + PS417_11505 0.82 -0.3 2,474,943 + PS417_11505 0.82 +0.2 2,474,943 + PS417_11505 0.82 -0.6
Or see this region's nucleotide sequence