Experiment: Scopoletin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17800 and PS417_17805 overlap by 14 nucleotides PS417_17805 and PS417_17810 overlap by 4 nucleotides
PS417_17800: PS417_17800 - microcin B17-processing protein McbD, at 3,886,035 to 3,887,228
_17800
PS417_17805: PS417_17805 - microcin B17 processing protein McbC, at 3,887,215 to 3,888,021
_17805
PS417_17810: PS417_17810 - microcin B17-processing protein McbB, at 3,888,018 to 3,888,875
_17810
Position (kb)
3887
3888
3889 Strain fitness (log2 ratio)
-2
-1
0
1 at 3886.322 kb on - strand, within PS417_17800 at 3886.460 kb on + strand, within PS417_17800 at 3886.531 kb on - strand, within PS417_17800 at 3886.612 kb on + strand, within PS417_17800 at 3886.825 kb on + strand, within PS417_17800 at 3886.826 kb on - strand, within PS417_17800 at 3886.841 kb on + strand at 3886.866 kb on - strand, within PS417_17800 at 3886.908 kb on - strand, within PS417_17800 at 3886.910 kb on - strand, within PS417_17800 at 3887.068 kb on - strand, within PS417_17800 at 3887.068 kb on - strand, within PS417_17800 at 3887.068 kb on - strand, within PS417_17800 at 3887.100 kb on + strand, within PS417_17800 at 3887.185 kb on - strand at 3887.442 kb on + strand, within PS417_17805 at 3887.443 kb on - strand, within PS417_17805 at 3887.445 kb on - strand, within PS417_17805 at 3887.488 kb on - strand at 3887.713 kb on - strand at 3887.713 kb on - strand, within PS417_17805 at 3888.048 kb on - strand at 3888.132 kb on - strand, within PS417_17810 at 3888.132 kb on - strand, within PS417_17810 at 3888.353 kb on + strand, within PS417_17810 at 3888.355 kb on + strand, within PS417_17810 at 3888.483 kb on + strand, within PS417_17810 at 3888.540 kb on - strand, within PS417_17810 at 3888.617 kb on + strand, within PS417_17810 at 3888.869 kb on + strand at 3888.966 kb on + strand at 3888.967 kb on - strand at 3888.977 kb on + strand at 3889.002 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 3 mM; solid stress remove 3,886,322 - PS417_17800 0.24 -0.1 3,886,460 + PS417_17800 0.36 -0.9 3,886,531 - PS417_17800 0.42 -0.5 3,886,612 + PS417_17800 0.48 -0.3 3,886,825 + PS417_17800 0.66 -0.3 3,886,826 - PS417_17800 0.66 +0.2 3,886,841 + +0.9 3,886,866 - PS417_17800 0.70 -0.0 3,886,908 - PS417_17800 0.73 +0.1 3,886,910 - PS417_17800 0.73 +0.2 3,887,068 - PS417_17800 0.87 +0.6 3,887,068 - PS417_17800 0.87 +1.1 3,887,068 - PS417_17800 0.87 +0.3 3,887,100 + PS417_17800 0.89 +1.3 3,887,185 - -0.4 3,887,442 + PS417_17805 0.28 -0.5 3,887,443 - PS417_17805 0.28 -1.3 3,887,445 - PS417_17805 0.29 -1.7 3,887,488 - +1.3 3,887,713 - +0.3 3,887,713 - PS417_17805 0.62 -0.5 3,888,048 - -0.0 3,888,132 - PS417_17810 0.13 -0.1 3,888,132 - PS417_17810 0.13 +0.2 3,888,353 + PS417_17810 0.39 -1.4 3,888,355 + PS417_17810 0.39 +0.2 3,888,483 + PS417_17810 0.54 +0.0 3,888,540 - PS417_17810 0.61 -0.5 3,888,617 + PS417_17810 0.70 -1.2 3,888,869 + -0.1 3,888,966 + -0.1 3,888,967 - -0.5 3,888,977 + -0.1 3,889,002 - -1.8
Or see this region's nucleotide sequence