Experiment: Scopoletin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22200 and PS417_22205 are separated by 155 nucleotides PS417_22205 and PS417_22210 overlap by 44 nucleotides
PS417_22200: PS417_22200 - hypothetical protein, at 4,809,252 to 4,813,466
_22200
PS417_22205: PS417_22205 - potassium transporter TrkH, at 4,813,622 to 4,815,076
_22205
PS417_22210: PS417_22210 - AraC family transcriptional regulator, at 4,815,033 to 4,816,091
_22210
Position (kb)
4813
4814
4815
4816 Strain fitness (log2 ratio)
-1
0
1 at 4812.771 kb on + strand, within PS417_22200 at 4812.779 kb on - strand, within PS417_22200 at 4813.007 kb on - strand, within PS417_22200 at 4813.491 kb on - strand at 4813.530 kb on + strand at 4813.530 kb on + strand at 4813.535 kb on - strand at 4813.535 kb on - strand at 4813.566 kb on + strand at 4813.566 kb on + strand at 4813.567 kb on - strand at 4813.642 kb on + strand at 4813.643 kb on - strand at 4813.841 kb on + strand, within PS417_22205 at 4813.841 kb on + strand, within PS417_22205 at 4813.841 kb on + strand, within PS417_22205 at 4813.842 kb on - strand, within PS417_22205 at 4813.876 kb on + strand, within PS417_22205 at 4813.877 kb on - strand, within PS417_22205 at 4813.877 kb on - strand, within PS417_22205 at 4813.919 kb on + strand, within PS417_22205 at 4813.919 kb on + strand, within PS417_22205 at 4813.920 kb on - strand, within PS417_22205 at 4813.969 kb on + strand, within PS417_22205 at 4814.387 kb on + strand, within PS417_22205 at 4814.388 kb on - strand, within PS417_22205 at 4814.591 kb on + strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4815.425 kb on - strand, within PS417_22210 at 4815.425 kb on - strand, within PS417_22210 at 4815.521 kb on - strand, within PS417_22210 at 4815.709 kb on - strand, within PS417_22210 at 4815.728 kb on - strand, within PS417_22210
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 2 mM; solid stress remove 4,812,771 + PS417_22200 0.83 +1.0 4,812,779 - PS417_22200 0.84 +0.1 4,813,007 - PS417_22200 0.89 +0.0 4,813,491 - +1.1 4,813,530 + -0.1 4,813,530 + -0.5 4,813,535 - -0.7 4,813,535 - -0.1 4,813,566 + -0.2 4,813,566 + -0.4 4,813,567 - -0.5 4,813,642 + +1.1 4,813,643 - +0.1 4,813,841 + PS417_22205 0.15 -0.5 4,813,841 + PS417_22205 0.15 -1.1 4,813,841 + PS417_22205 0.15 -1.6 4,813,842 - PS417_22205 0.15 -0.2 4,813,876 + PS417_22205 0.17 +0.9 4,813,877 - PS417_22205 0.18 -0.6 4,813,877 - PS417_22205 0.18 +0.6 4,813,919 + PS417_22205 0.20 -0.7 4,813,919 + PS417_22205 0.20 -0.6 4,813,920 - PS417_22205 0.20 -0.2 4,813,969 + PS417_22205 0.24 -0.1 4,814,387 + PS417_22205 0.53 +0.5 4,814,388 - PS417_22205 0.53 -1.4 4,814,591 + PS417_22205 0.67 -1.6 4,814,703 - PS417_22205 0.74 -1.2 4,814,703 - PS417_22205 0.74 -0.9 4,814,703 - PS417_22205 0.74 -0.8 4,814,703 - PS417_22205 0.74 -0.2 4,814,703 - PS417_22205 0.74 -1.0 4,815,425 - PS417_22210 0.37 +0.1 4,815,425 - PS417_22210 0.37 +1.3 4,815,521 - PS417_22210 0.46 +1.0 4,815,709 - PS417_22210 0.64 +0.5 4,815,728 - PS417_22210 0.66 +0.0
Or see this region's nucleotide sequence