Experiment: Scopoletin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13155 and PS417_13160 are separated by 63 nucleotides PS417_13160 and PS417_13165 are separated by 27 nucleotides PS417_13165 and PS417_13170 are separated by 14 nucleotides
PS417_13155: PS417_13155 - phosphatidylserine synthase, at 2,873,776 to 2,875,119
_13155
PS417_13160: PS417_13160 - iron transporter, at 2,875,183 to 2,876,001
_13160
PS417_13165: PS417_13165 - peroxidase, at 2,876,029 to 2,877,333
_13165
PS417_13170: PS417_13170 - multidrug DMT transporter permease, at 2,877,348 to 2,878,550
_13170
Position (kb)
2876
2877
2878 Strain fitness (log2 ratio)
-2
-1
0
1 at 2875.117 kb on + strand at 2875.184 kb on + strand at 2875.185 kb on - strand at 2875.448 kb on + strand, within PS417_13160 at 2875.531 kb on + strand, within PS417_13160 at 2875.531 kb on + strand, within PS417_13160 at 2875.532 kb on - strand, within PS417_13160 at 2875.629 kb on + strand, within PS417_13160 at 2875.648 kb on + strand, within PS417_13160 at 2875.648 kb on + strand at 2875.653 kb on - strand, within PS417_13160 at 2875.653 kb on - strand, within PS417_13160 at 2875.775 kb on + strand at 2875.775 kb on + strand, within PS417_13160 at 2875.775 kb on + strand, within PS417_13160 at 2876.030 kb on + strand at 2876.031 kb on - strand at 2876.031 kb on - strand at 2876.147 kb on + strand at 2876.147 kb on + strand at 2876.384 kb on + strand, within PS417_13165 at 2876.523 kb on - strand, within PS417_13165 at 2877.095 kb on - strand, within PS417_13165 at 2877.457 kb on + strand at 2877.637 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.667 kb on - strand, within PS417_13170 at 2877.827 kb on - strand, within PS417_13170 at 2877.971 kb on - strand, within PS417_13170 at 2878.063 kb on + strand, within PS417_13170 at 2878.199 kb on - strand, within PS417_13170
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 2 mM; solid stress remove 2,875,117 + +0.5 2,875,184 + -0.3 2,875,185 - -0.1 2,875,448 + PS417_13160 0.32 +0.3 2,875,531 + PS417_13160 0.42 -0.2 2,875,531 + PS417_13160 0.42 +0.1 2,875,532 - PS417_13160 0.43 -0.1 2,875,629 + PS417_13160 0.54 -0.1 2,875,648 + PS417_13160 0.57 +0.1 2,875,648 + +1.5 2,875,653 - PS417_13160 0.57 -0.2 2,875,653 - PS417_13160 0.57 -0.2 2,875,775 + +1.5 2,875,775 + PS417_13160 0.72 +0.2 2,875,775 + PS417_13160 0.72 -0.5 2,876,030 + -1.0 2,876,031 - -0.3 2,876,031 - -0.1 2,876,147 + -0.2 2,876,147 + +0.9 2,876,384 + PS417_13165 0.27 -1.8 2,876,523 - PS417_13165 0.38 -0.2 2,877,095 - PS417_13165 0.82 -0.9 2,877,457 + +1.0 2,877,637 + PS417_13170 0.24 -0.1 2,877,666 + PS417_13170 0.26 -0.6 2,877,666 + PS417_13170 0.26 -0.7 2,877,666 + PS417_13170 0.26 -1.0 2,877,666 + PS417_13170 0.26 +0.2 2,877,667 - PS417_13170 0.27 -0.1 2,877,827 - PS417_13170 0.40 -0.3 2,877,971 - PS417_13170 0.52 +0.4 2,878,063 + PS417_13170 0.59 +0.0 2,878,199 - PS417_13170 0.71 +0.7
Or see this region's nucleotide sequence