Experiment: Scopoletin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13090 and PS417_13095 overlap by 7 nucleotides PS417_13095 and PS417_13100 are separated by 164 nucleotides
PS417_13090: PS417_13090 - dienelactone hydrolase, at 2,859,503 to 2,860,540
_13090
PS417_13095: PS417_13095 - MFS transporter, at 2,860,534 to 2,861,709
_13095
PS417_13100: PS417_13100 - ABC transporter ATP-binding protein, at 2,861,874 to 2,863,460
_13100
Position (kb)
2860
2861
2862 Strain fitness (log2 ratio)
-1
0
1 at 2859.659 kb on + strand, within PS417_13090 at 2859.823 kb on + strand, within PS417_13090 at 2859.823 kb on + strand, within PS417_13090 at 2859.867 kb on - strand, within PS417_13090 at 2859.867 kb on - strand at 2860.254 kb on - strand, within PS417_13090 at 2860.688 kb on + strand, within PS417_13095 at 2860.689 kb on - strand, within PS417_13095 at 2860.689 kb on - strand, within PS417_13095 at 2860.908 kb on + strand, within PS417_13095 at 2860.909 kb on - strand, within PS417_13095 at 2860.909 kb on - strand, within PS417_13095 at 2860.929 kb on + strand, within PS417_13095 at 2860.958 kb on + strand, within PS417_13095 at 2860.988 kb on + strand, within PS417_13095 at 2860.991 kb on + strand, within PS417_13095 at 2861.001 kb on + strand at 2861.064 kb on + strand, within PS417_13095 at 2861.187 kb on - strand, within PS417_13095 at 2861.405 kb on - strand, within PS417_13095 at 2861.534 kb on + strand, within PS417_13095 at 2861.595 kb on - strand at 2861.595 kb on - strand at 2861.648 kb on + strand at 2861.780 kb on + strand at 2861.781 kb on - strand at 2861.783 kb on + strand at 2861.838 kb on - strand at 2861.902 kb on + strand at 2861.902 kb on + strand at 2861.903 kb on - strand at 2861.911 kb on + strand at 2861.912 kb on - strand at 2862.020 kb on - strand at 2862.302 kb on - strand, within PS417_13100
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 2 mM; solid stress remove 2,859,659 + PS417_13090 0.15 -0.2 2,859,823 + PS417_13090 0.31 +0.2 2,859,823 + PS417_13090 0.31 +0.2 2,859,867 - PS417_13090 0.35 +0.1 2,859,867 - -0.1 2,860,254 - PS417_13090 0.72 +0.0 2,860,688 + PS417_13095 0.13 -0.3 2,860,689 - PS417_13095 0.13 +0.3 2,860,689 - PS417_13095 0.13 +0.7 2,860,908 + PS417_13095 0.32 +0.1 2,860,909 - PS417_13095 0.32 +0.1 2,860,909 - PS417_13095 0.32 +0.5 2,860,929 + PS417_13095 0.34 +0.2 2,860,958 + PS417_13095 0.36 +1.3 2,860,988 + PS417_13095 0.39 +0.3 2,860,991 + PS417_13095 0.39 +0.9 2,861,001 + +0.2 2,861,064 + PS417_13095 0.45 +0.1 2,861,187 - PS417_13095 0.56 +1.2 2,861,405 - PS417_13095 0.74 -0.0 2,861,534 + PS417_13095 0.85 +0.3 2,861,595 - -0.5 2,861,595 - +0.6 2,861,648 + -0.2 2,861,780 + +0.5 2,861,781 - +1.1 2,861,783 + -0.0 2,861,838 - -0.1 2,861,902 + +0.7 2,861,902 + -0.2 2,861,903 - +0.8 2,861,911 + +0.3 2,861,912 - -0.3 2,862,020 - -0.3 2,862,302 - PS417_13100 0.27 -0.2
Or see this region's nucleotide sequence