Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22650 and PS417_22655 are separated by 101 nucleotides PS417_22655 and PS417_22660 are separated by 124 nucleotides PS417_22660 and PS417_22665 are separated by 45 nucleotides PS417_22665 and PS417_22670 are separated by 327 nucleotides
PS417_22650: PS417_22650 - MFS transporter, at 4,905,809 to 4,907,128
_22650
PS417_22655: PS417_22655 - Asp/Glu/hydantoin racemase, at 4,907,230 to 4,907,862
_22655
PS417_22660: PS417_22660 - hypothetical protein, at 4,907,987 to 4,908,232
_22660
PS417_22665: PS417_22665 - antibiotic biosynthesis monooxygenase, at 4,908,278 to 4,908,619
_22665
PS417_22670: PS417_22670 - AraC family transcriptional regulator, at 4,908,947 to 4,909,876
_22670
Position (kb)
4907
4908
4909 Strain fitness (log2 ratio)
-1
0
1
2 at 4906.992 kb on - strand, within PS417_22650 at 4907.036 kb on + strand at 4907.042 kb on + strand at 4907.043 kb on - strand at 4907.078 kb on + strand at 4907.078 kb on + strand at 4907.078 kb on + strand at 4907.079 kb on - strand at 4907.126 kb on + strand at 4907.393 kb on - strand, within PS417_22655 at 4907.696 kb on + strand at 4907.837 kb on - strand at 4907.869 kb on + strand at 4907.875 kb on - strand at 4908.169 kb on - strand, within PS417_22660 at 4908.169 kb on - strand, within PS417_22660 at 4908.189 kb on - strand, within PS417_22660 at 4908.269 kb on + strand at 4908.411 kb on + strand at 4908.593 kb on - strand at 4908.593 kb on - strand at 4908.732 kb on + strand at 4908.732 kb on + strand at 4908.760 kb on + strand at 4908.761 kb on - strand at 4908.783 kb on - strand at 4908.885 kb on - strand at 4908.927 kb on + strand at 4908.934 kb on + strand at 4908.964 kb on + strand at 4908.964 kb on + strand at 4908.964 kb on + strand at 4908.964 kb on + strand at 4908.965 kb on - strand at 4908.965 kb on - strand at 4909.052 kb on + strand, within PS417_22670 at 4909.053 kb on - strand, within PS417_22670 at 4909.053 kb on - strand, within PS417_22670 at 4909.058 kb on - strand, within PS417_22670 at 4909.205 kb on + strand, within PS417_22670
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 4,906,992 - PS417_22650 0.90 +1.0 4,907,036 + -0.2 4,907,042 + +0.3 4,907,043 - -0.5 4,907,078 + +0.3 4,907,078 + -0.3 4,907,078 + +0.5 4,907,079 - +0.0 4,907,126 + -0.3 4,907,393 - PS417_22655 0.26 +0.7 4,907,696 + +1.1 4,907,837 - +0.3 4,907,869 + -0.1 4,907,875 - +1.8 4,908,169 - PS417_22660 0.74 +0.0 4,908,169 - PS417_22660 0.74 +0.0 4,908,189 - PS417_22660 0.82 +2.0 4,908,269 + +0.6 4,908,411 + -0.2 4,908,593 - -0.0 4,908,593 - +1.2 4,908,732 + +0.3 4,908,732 + +1.2 4,908,760 + -0.5 4,908,761 - -0.8 4,908,783 - -0.1 4,908,885 - -0.9 4,908,927 + +0.1 4,908,934 + -1.2 4,908,964 + -0.2 4,908,964 + -1.0 4,908,964 + -1.6 4,908,964 + -0.2 4,908,965 - -0.1 4,908,965 - +0.6 4,909,052 + PS417_22670 0.11 +0.1 4,909,053 - PS417_22670 0.11 -0.2 4,909,053 - PS417_22670 0.11 -0.1 4,909,058 - PS417_22670 0.12 -0.8 4,909,205 + PS417_22670 0.28 +0.0
Or see this region's nucleotide sequence