Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14280 and PS417_14285 are separated by 204 nucleotides PS417_14285 and PS417_14290 are separated by 148 nucleotides
PS417_14280: PS417_14280 - hypothetical protein, at 3,124,304 to 3,125,230
_14280
PS417_14285: PS417_14285 - hypothetical protein, at 3,125,435 to 3,126,211
_14285
PS417_14290: PS417_14290 - trehalose synthase, at 3,126,360 to 3,128,423
_14290
Position (kb)
3125
3126
3127 Strain fitness (log2 ratio)
-1
0
1
2 at 3124.553 kb on + strand, within PS417_14280 at 3124.762 kb on - strand, within PS417_14280 at 3124.920 kb on + strand, within PS417_14280 at 3124.921 kb on - strand, within PS417_14280 at 3125.103 kb on - strand, within PS417_14280 at 3125.300 kb on - strand at 3125.300 kb on - strand at 3125.344 kb on + strand at 3125.422 kb on + strand at 3125.422 kb on + strand at 3125.504 kb on - strand at 3125.516 kb on + strand, within PS417_14285 at 3125.517 kb on - strand, within PS417_14285 at 3125.782 kb on - strand, within PS417_14285 at 3125.917 kb on - strand, within PS417_14285 at 3125.919 kb on + strand, within PS417_14285 at 3125.919 kb on + strand, within PS417_14285 at 3125.919 kb on + strand, within PS417_14285 at 3125.920 kb on - strand, within PS417_14285 at 3125.984 kb on - strand, within PS417_14285 at 3126.086 kb on + strand, within PS417_14285 at 3126.149 kb on + strand at 3126.177 kb on - strand at 3126.236 kb on + strand at 3126.251 kb on - strand at 3126.291 kb on + strand at 3126.404 kb on - strand at 3126.422 kb on + strand at 3126.650 kb on - strand, within PS417_14290 at 3126.752 kb on + strand, within PS417_14290 at 3126.753 kb on - strand, within PS417_14290 at 3126.929 kb on - strand, within PS417_14290 at 3126.929 kb on - strand, within PS417_14290 at 3126.929 kb on - strand, within PS417_14290 at 3126.929 kb on - strand, within PS417_14290 at 3127.099 kb on + strand, within PS417_14290 at 3127.100 kb on - strand, within PS417_14290 at 3127.100 kb on - strand, within PS417_14290
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 3,124,553 + PS417_14280 0.27 +0.1 3,124,762 - PS417_14280 0.49 +0.9 3,124,920 + PS417_14280 0.66 -1.3 3,124,921 - PS417_14280 0.67 -0.6 3,125,103 - PS417_14280 0.86 -0.3 3,125,300 - -0.6 3,125,300 - -0.1 3,125,344 + -0.5 3,125,422 + -0.1 3,125,422 + -0.1 3,125,504 - -0.3 3,125,516 + PS417_14285 0.10 +0.0 3,125,517 - PS417_14285 0.11 -0.1 3,125,782 - PS417_14285 0.45 -0.2 3,125,917 - PS417_14285 0.62 +2.7 3,125,919 + PS417_14285 0.62 +1.2 3,125,919 + PS417_14285 0.62 -0.4 3,125,919 + PS417_14285 0.62 +0.7 3,125,920 - PS417_14285 0.62 +0.2 3,125,984 - PS417_14285 0.71 -0.3 3,126,086 + PS417_14285 0.84 -0.0 3,126,149 + -0.1 3,126,177 - -0.5 3,126,236 + -0.4 3,126,251 - -0.1 3,126,291 + -0.3 3,126,404 - +0.5 3,126,422 + +0.6 3,126,650 - PS417_14290 0.14 +1.5 3,126,752 + PS417_14290 0.19 -0.2 3,126,753 - PS417_14290 0.19 -0.6 3,126,929 - PS417_14290 0.28 -1.0 3,126,929 - PS417_14290 0.28 -0.0 3,126,929 - PS417_14290 0.28 +0.2 3,126,929 - PS417_14290 0.28 +0.4 3,127,099 + PS417_14290 0.36 +0.2 3,127,100 - PS417_14290 0.36 -0.1 3,127,100 - PS417_14290 0.36 +0.0
Or see this region's nucleotide sequence