Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13330 and PS417_13335 are separated by 314 nucleotides PS417_13335 and PS417_13340 are separated by 20 nucleotides
PS417_13330: PS417_13330 - autotransporter, at 2,929,530 to 2,931,185
_13330
PS417_13335: PS417_13335 - aldo/keto reductase, at 2,931,500 to 2,932,486
_13335
PS417_13340: PS417_13340 - hypothetical protein, at 2,932,507 to 2,933,664
_13340
Position (kb)
2931
2932
2933 Strain fitness (log2 ratio)
-1
0
1 at 2930.508 kb on + strand, within PS417_13330 at 2930.548 kb on + strand, within PS417_13330 at 2930.548 kb on + strand, within PS417_13330 at 2930.548 kb on + strand, within PS417_13330 at 2930.548 kb on + strand, within PS417_13330 at 2930.549 kb on - strand, within PS417_13330 at 2930.549 kb on - strand, within PS417_13330 at 2930.549 kb on - strand, within PS417_13330 at 2930.549 kb on - strand, within PS417_13330 at 2930.549 kb on - strand, within PS417_13330 at 2930.602 kb on + strand, within PS417_13330 at 2930.944 kb on + strand, within PS417_13330 at 2930.944 kb on + strand, within PS417_13330 at 2930.944 kb on + strand, within PS417_13330 at 2930.944 kb on + strand, within PS417_13330 at 2931.076 kb on - strand at 2931.100 kb on + strand at 2931.849 kb on - strand, within PS417_13335 at 2931.883 kb on + strand, within PS417_13335 at 2932.452 kb on - strand at 2932.664 kb on - strand, within PS417_13340 at 2932.664 kb on - strand, within PS417_13340 at 2932.686 kb on - strand, within PS417_13340 at 2932.932 kb on + strand, within PS417_13340 at 2933.050 kb on + strand, within PS417_13340 at 2933.163 kb on + strand, within PS417_13340 at 2933.164 kb on - strand, within PS417_13340 at 2933.164 kb on - strand, within PS417_13340 at 2933.167 kb on + strand, within PS417_13340 at 2933.167 kb on + strand, within PS417_13340 at 2933.168 kb on - strand, within PS417_13340 at 2933.168 kb on - strand, within PS417_13340 at 2933.168 kb on - strand, within PS417_13340 at 2933.311 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 2,930,508 + PS417_13330 0.59 -1.0 2,930,548 + PS417_13330 0.61 +0.4 2,930,548 + PS417_13330 0.61 -0.5 2,930,548 + PS417_13330 0.61 -1.1 2,930,548 + PS417_13330 0.61 +0.8 2,930,549 - PS417_13330 0.62 -0.3 2,930,549 - PS417_13330 0.62 -0.8 2,930,549 - PS417_13330 0.62 +0.2 2,930,549 - PS417_13330 0.62 -0.2 2,930,549 - PS417_13330 0.62 +0.3 2,930,602 + PS417_13330 0.65 -1.3 2,930,944 + PS417_13330 0.85 -0.1 2,930,944 + PS417_13330 0.85 +0.5 2,930,944 + PS417_13330 0.85 -0.5 2,930,944 + PS417_13330 0.85 +0.4 2,931,076 - +0.2 2,931,100 + -0.3 2,931,849 - PS417_13335 0.35 -0.2 2,931,883 + PS417_13335 0.39 +0.8 2,932,452 - -0.1 2,932,664 - PS417_13340 0.14 +0.9 2,932,664 - PS417_13340 0.14 +0.0 2,932,686 - PS417_13340 0.15 +1.1 2,932,932 + PS417_13340 0.37 +0.0 2,933,050 + PS417_13340 0.47 +0.2 2,933,163 + PS417_13340 0.57 +0.0 2,933,164 - PS417_13340 0.57 +0.7 2,933,164 - PS417_13340 0.57 -0.3 2,933,167 + PS417_13340 0.57 +1.3 2,933,167 + PS417_13340 0.57 +0.2 2,933,168 - PS417_13340 0.57 -0.6 2,933,168 - PS417_13340 0.57 -0.2 2,933,168 - PS417_13340 0.57 -0.1 2,933,311 + -0.4
Or see this region's nucleotide sequence