Experiment: 80% Methanol 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22905 and PS417_22910 are separated by 45 nucleotides PS417_22910 and PS417_22915 are separated by 2 nucleotides PS417_22915 and PS417_22920 are separated by 5 nucleotides PS417_22920 and PS417_22925 are separated by 250 nucleotides
PS417_22905: PS417_22905 - 50S ribosomal protein L19, at 4,963,690 to 4,964,040
_22905
PS417_22910: PS417_22910 - tRNA (guanine-N1)-methyltransferase, at 4,964,086 to 4,964,838
_22910
PS417_22915: PS417_22915 - 16S rRNA processing protein RimM, at 4,964,841 to 4,965,377
_22915
PS417_22920: PS417_22920 - 30S ribosomal protein S16, at 4,965,383 to 4,965,634
_22920
PS417_22925: PS417_22925 - RNA-binding protein, at 4,965,885 to 4,967,261
_22925
Position (kb)
4964
4965
4966 Strain fitness (log2 ratio)
-2
-1
0
1 at 4964.057 kb on - strand at 4964.057 kb on - strand at 4964.071 kb on - strand at 4964.843 kb on - strand at 4965.778 kb on - strand at 4965.780 kb on - strand at 4965.881 kb on + strand at 4965.917 kb on + strand at 4965.917 kb on + strand at 4965.917 kb on + strand at 4965.917 kb on + strand at 4965.918 kb on - strand at 4965.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; solid stress remove 4,964,057 - -0.0 4,964,057 - +0.5 4,964,071 - -0.0 4,964,843 - -0.7 4,965,778 - +0.7 4,965,780 - +0.4 4,965,881 + +0.1 4,965,917 + +1.1 4,965,917 + -1.9 4,965,917 + +0.1 4,965,917 + -0.1 4,965,918 - -0.0 4,965,918 - -0.1
Or see this region's nucleotide sequence