Experiment: 80% Methanol 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13480 and PS417_13485 are separated by 49 nucleotides PS417_13485 and PS417_13490 are separated by 40 nucleotides PS417_13490 and PS417_13495 are separated by 186 nucleotides
PS417_13480: PS417_13480 - serine protease, at 2,968,388 to 2,971,498
_13480
PS417_13485: PS417_13485 - lipase, at 2,971,548 to 2,972,960
_13485
PS417_13490: PS417_13490 - hypothetical protein, at 2,973,001 to 2,973,225
_13490
PS417_13495: PS417_13495 - nuclease, at 2,973,412 to 2,975,058
_13495
Position (kb)
2971
2972
2973 Strain fitness (log2 ratio)
-1
0
1 at 2970.557 kb on + strand, within PS417_13480 at 2970.597 kb on - strand, within PS417_13480 at 2970.600 kb on + strand, within PS417_13480 at 2970.601 kb on - strand, within PS417_13480 at 2970.739 kb on + strand, within PS417_13480 at 2970.739 kb on + strand, within PS417_13480 at 2970.941 kb on + strand, within PS417_13480 at 2971.103 kb on + strand, within PS417_13480 at 2971.103 kb on + strand, within PS417_13480 at 2971.104 kb on - strand, within PS417_13480 at 2971.104 kb on - strand, within PS417_13480 at 2971.506 kb on + strand at 2971.506 kb on + strand at 2971.506 kb on + strand at 2971.507 kb on - strand at 2971.553 kb on + strand at 2971.565 kb on + strand at 2971.626 kb on + strand at 2971.633 kb on - strand at 2971.700 kb on + strand, within PS417_13485 at 2971.700 kb on + strand, within PS417_13485 at 2971.798 kb on + strand, within PS417_13485 at 2971.894 kb on - strand at 2971.894 kb on - strand, within PS417_13485 at 2972.244 kb on + strand, within PS417_13485 at 2972.245 kb on - strand, within PS417_13485 at 2972.245 kb on - strand, within PS417_13485 at 2972.254 kb on - strand, within PS417_13485 at 2972.400 kb on - strand, within PS417_13485 at 2972.603 kb on + strand, within PS417_13485 at 2972.651 kb on + strand, within PS417_13485 at 2972.651 kb on + strand, within PS417_13485 at 2972.831 kb on - strand at 2972.843 kb on - strand at 2972.994 kb on + strand at 2973.122 kb on + strand, within PS417_13490 at 2973.123 kb on - strand, within PS417_13490 at 2973.337 kb on + strand at 2973.337 kb on + strand at 2973.338 kb on - strand at 2973.342 kb on - strand at 2973.342 kb on - strand at 2973.342 kb on - strand at 2973.439 kb on + strand at 2973.439 kb on + strand at 2973.443 kb on - strand at 2973.443 kb on - strand at 2973.619 kb on + strand, within PS417_13495 at 2973.619 kb on + strand, within PS417_13495 at 2973.620 kb on - strand, within PS417_13495 at 2973.693 kb on - strand, within PS417_13495 at 2973.869 kb on - strand, within PS417_13495
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 0.5 mM; solid stress remove 2,970,557 + PS417_13480 0.70 -0.0 2,970,597 - PS417_13480 0.71 +0.9 2,970,600 + PS417_13480 0.71 -0.2 2,970,601 - PS417_13480 0.71 -0.1 2,970,739 + PS417_13480 0.76 +0.2 2,970,739 + PS417_13480 0.76 +0.1 2,970,941 + PS417_13480 0.82 -0.6 2,971,103 + PS417_13480 0.87 -0.3 2,971,103 + PS417_13480 0.87 +0.1 2,971,104 - PS417_13480 0.87 -0.2 2,971,104 - PS417_13480 0.87 -0.3 2,971,506 + +0.2 2,971,506 + -0.1 2,971,506 + -0.1 2,971,507 - -0.2 2,971,553 + -0.2 2,971,565 + +0.2 2,971,626 + -0.3 2,971,633 - +0.4 2,971,700 + PS417_13485 0.11 -0.8 2,971,700 + PS417_13485 0.11 -0.2 2,971,798 + PS417_13485 0.18 -0.6 2,971,894 - -0.2 2,971,894 - PS417_13485 0.24 -0.1 2,972,244 + PS417_13485 0.49 -1.2 2,972,245 - PS417_13485 0.49 -0.3 2,972,245 - PS417_13485 0.49 -0.7 2,972,254 - PS417_13485 0.50 +0.3 2,972,400 - PS417_13485 0.60 -0.6 2,972,603 + PS417_13485 0.75 -0.1 2,972,651 + PS417_13485 0.78 -0.3 2,972,651 + PS417_13485 0.78 -0.4 2,972,831 - +0.3 2,972,843 - +1.7 2,972,994 + +0.0 2,973,122 + PS417_13490 0.54 -0.9 2,973,123 - PS417_13490 0.54 -0.9 2,973,337 + +0.2 2,973,337 + +0.1 2,973,338 - -0.2 2,973,342 - -0.3 2,973,342 - -0.3 2,973,342 - +0.2 2,973,439 + +0.1 2,973,439 + -0.0 2,973,443 - +0.5 2,973,443 - +0.2 2,973,619 + PS417_13495 0.13 +0.3 2,973,619 + PS417_13495 0.13 +0.1 2,973,620 - PS417_13495 0.13 +0.1 2,973,693 - PS417_13495 0.17 -1.2 2,973,869 - PS417_13495 0.28 +0.3
Or see this region's nucleotide sequence