Experiment: Fraxetin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02525 and PS417_02530 overlap by 1 nucleotides PS417_02530 and PS417_02535 are separated by 144 nucleotides PS417_02535 and PS417_02540 are separated by 152 nucleotides PS417_02540 and PS417_02545 are separated by 152 nucleotides PS417_02545 and PS417_02550 are separated by 152 nucleotides
PS417_02525: PS417_02525 - iron ABC transporter permease, at 578,188 to 579,753
_02525
PS417_02530: PS417_02530 - iron ABC transporter substrate-binding protein, at 579,753 to 580,778
_02530
PS417_02535: PS417_02535 - tRNA-Leu, at 580,923 to 581,009
_02535
PS417_02540: PS417_02540 - tRNA-Leu, at 581,162 to 581,248
_02540
PS417_02545: PS417_02545 - tRNA-Leu, at 581,401 to 581,487
_02545
PS417_02550: PS417_02550 - tRNA-Leu, at 581,640 to 581,726
_02550
Position (kb)
579
580
581 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 578.831 kb on - strand, within PS417_02525 at 578.831 kb on - strand, within PS417_02525 at 578.831 kb on - strand, within PS417_02525 at 578.897 kb on + strand, within PS417_02525 at 578.897 kb on + strand, within PS417_02525 at 578.897 kb on + strand, within PS417_02525 at 579.010 kb on + strand, within PS417_02525 at 579.010 kb on + strand, within PS417_02525 at 579.093 kb on - strand, within PS417_02525 at 579.093 kb on - strand, within PS417_02525 at 579.105 kb on + strand, within PS417_02525 at 579.153 kb on + strand, within PS417_02525 at 579.153 kb on + strand, within PS417_02525 at 579.153 kb on + strand, within PS417_02525 at 579.154 kb on - strand, within PS417_02525 at 579.154 kb on - strand, within PS417_02525 at 579.154 kb on - strand, within PS417_02525 at 579.170 kb on - strand, within PS417_02525 at 579.566 kb on + strand, within PS417_02525 at 579.586 kb on + strand, within PS417_02525 at 579.629 kb on + strand at 579.629 kb on + strand at 580.039 kb on + strand, within PS417_02530 at 580.039 kb on + strand, within PS417_02530 at 580.039 kb on + strand, within PS417_02530 at 580.040 kb on - strand, within PS417_02530 at 580.090 kb on + strand, within PS417_02530 at 580.093 kb on + strand, within PS417_02530 at 580.093 kb on + strand, within PS417_02530 at 580.093 kb on + strand, within PS417_02530 at 580.094 kb on - strand, within PS417_02530 at 580.162 kb on + strand, within PS417_02530 at 580.414 kb on + strand, within PS417_02530 at 580.414 kb on + strand, within PS417_02530 at 580.414 kb on + strand, within PS417_02530 at 580.426 kb on - strand, within PS417_02530 at 580.428 kb on + strand, within PS417_02530 at 580.428 kb on + strand, within PS417_02530 at 580.428 kb on + strand, within PS417_02530 at 580.428 kb on + strand, within PS417_02530 at 580.429 kb on - strand, within PS417_02530 at 580.429 kb on - strand, within PS417_02530 at 580.429 kb on - strand, within PS417_02530 at 580.507 kb on + strand, within PS417_02530 at 580.581 kb on + strand, within PS417_02530 at 580.581 kb on + strand, within PS417_02530 at 580.582 kb on - strand, within PS417_02530 at 580.582 kb on - strand, within PS417_02530 at 580.658 kb on - strand, within PS417_02530 at 580.687 kb on + strand at 581.765 kb on - strand at 581.767 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; liquid stress remove 578,831 - PS417_02525 0.41 -0.1 578,831 - PS417_02525 0.41 -1.1 578,831 - PS417_02525 0.41 -2.2 578,897 + PS417_02525 0.45 -0.4 578,897 + PS417_02525 0.45 -2.1 578,897 + PS417_02525 0.45 -1.0 579,010 + PS417_02525 0.52 -2.5 579,010 + PS417_02525 0.52 -1.4 579,093 - PS417_02525 0.58 -0.7 579,093 - PS417_02525 0.58 -0.8 579,105 + PS417_02525 0.59 +0.6 579,153 + PS417_02525 0.62 -1.4 579,153 + PS417_02525 0.62 -0.5 579,153 + PS417_02525 0.62 +0.2 579,154 - PS417_02525 0.62 +0.3 579,154 - PS417_02525 0.62 -0.5 579,154 - PS417_02525 0.62 -0.4 579,170 - PS417_02525 0.63 -0.6 579,566 + PS417_02525 0.88 -0.9 579,586 + PS417_02525 0.89 -1.7 579,629 + -1.2 579,629 + +1.3 580,039 + PS417_02530 0.28 -0.9 580,039 + PS417_02530 0.28 -0.1 580,039 + PS417_02530 0.28 +0.0 580,040 - PS417_02530 0.28 -0.4 580,090 + PS417_02530 0.33 -0.5 580,093 + PS417_02530 0.33 -0.6 580,093 + PS417_02530 0.33 -2.6 580,093 + PS417_02530 0.33 +0.5 580,094 - PS417_02530 0.33 -0.1 580,162 + PS417_02530 0.40 -1.2 580,414 + PS417_02530 0.64 +0.1 580,414 + PS417_02530 0.64 +0.8 580,414 + PS417_02530 0.64 -0.9 580,426 - PS417_02530 0.66 -2.7 580,428 + PS417_02530 0.66 -1.5 580,428 + PS417_02530 0.66 -1.2 580,428 + PS417_02530 0.66 -1.0 580,428 + PS417_02530 0.66 -0.4 580,429 - PS417_02530 0.66 -1.7 580,429 - PS417_02530 0.66 -2.7 580,429 - PS417_02530 0.66 -1.5 580,507 + PS417_02530 0.73 -0.2 580,581 + PS417_02530 0.81 -2.9 580,581 + PS417_02530 0.81 -0.9 580,582 - PS417_02530 0.81 +1.0 580,582 - PS417_02530 0.81 -0.6 580,658 - PS417_02530 0.88 -1.0 580,687 + -1.0 581,765 - -1.2 581,767 - -0.3
Or see this region's nucleotide sequence