Experiment: Scopoletin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_08985 and PS417_08990 overlap by 4 nucleotides
PS417_08985: PS417_08985 - histidine kinase, at 1,955,938 to 1,957,839
_08985
PS417_08990: PS417_08990 - ABC transporter substrate-binding protein, at 1,957,836 to 1,958,765
_08990
Position (kb)
1957
1958
1959 Strain fitness (log2 ratio)
-2
-1
0
1 at 1956.883 kb on - strand, within PS417_08985 at 1957.152 kb on + strand, within PS417_08985 at 1957.152 kb on + strand, within PS417_08985 at 1957.152 kb on + strand, within PS417_08985 at 1957.208 kb on + strand, within PS417_08985 at 1957.300 kb on - strand, within PS417_08985 at 1957.404 kb on - strand, within PS417_08985 at 1957.544 kb on + strand, within PS417_08985 at 1957.544 kb on + strand, within PS417_08985 at 1957.544 kb on + strand, within PS417_08985 at 1957.545 kb on - strand, within PS417_08985 at 1958.029 kb on + strand, within PS417_08990 at 1958.029 kb on + strand, within PS417_08990 at 1958.137 kb on + strand, within PS417_08990 at 1958.137 kb on + strand, within PS417_08990 at 1958.166 kb on + strand, within PS417_08990 at 1958.210 kb on + strand, within PS417_08990 at 1958.251 kb on - strand, within PS417_08990 at 1958.390 kb on + strand, within PS417_08990 at 1958.579 kb on + strand, within PS417_08990 at 1958.792 kb on + strand at 1958.813 kb on + strand at 1958.813 kb on + strand at 1958.813 kb on + strand at 1958.814 kb on - strand at 1958.814 kb on - strand at 1958.814 kb on - strand at 1958.814 kb on - strand at 1958.963 kb on + strand at 1958.963 kb on + strand at 1958.966 kb on + strand at 1958.967 kb on - strand at 1958.967 kb on - strand at 1959.077 kb on + strand at 1959.077 kb on + strand at 1959.078 kb on - strand at 1959.083 kb on + strand at 1959.083 kb on + strand at 1959.083 kb on + strand at 1959.084 kb on - strand at 1959.084 kb on - strand at 1959.084 kb on - strand at 1959.177 kb on - strand at 1959.180 kb on + strand at 1959.224 kb on + strand at 1959.225 kb on - strand at 1959.275 kb on + strand at 1959.276 kb on - strand at 1959.446 kb on + strand at 1959.482 kb on + strand at 1959.536 kb on + strand at 1959.536 kb on + strand at 1959.536 kb on + strand at 1959.728 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 3 mM; liquid stress remove 1,956,883 - PS417_08985 0.50 -0.3 1,957,152 + PS417_08985 0.64 +0.2 1,957,152 + PS417_08985 0.64 -1.1 1,957,152 + PS417_08985 0.64 +0.1 1,957,208 + PS417_08985 0.67 -0.2 1,957,300 - PS417_08985 0.72 -0.7 1,957,404 - PS417_08985 0.77 +0.2 1,957,544 + PS417_08985 0.84 +0.0 1,957,544 + PS417_08985 0.84 -0.5 1,957,544 + PS417_08985 0.84 -0.2 1,957,545 - PS417_08985 0.84 +0.1 1,958,029 + PS417_08990 0.21 -0.9 1,958,029 + PS417_08990 0.21 -0.2 1,958,137 + PS417_08990 0.32 -1.5 1,958,137 + PS417_08990 0.32 -1.0 1,958,166 + PS417_08990 0.35 -1.8 1,958,210 + PS417_08990 0.40 -1.3 1,958,251 - PS417_08990 0.45 -0.5 1,958,390 + PS417_08990 0.60 -0.6 1,958,579 + PS417_08990 0.80 -0.4 1,958,792 + -0.3 1,958,813 + +1.5 1,958,813 + -0.4 1,958,813 + -0.4 1,958,814 - +0.2 1,958,814 - +0.4 1,958,814 - +1.1 1,958,814 - +0.9 1,958,963 + -0.1 1,958,963 + +0.3 1,958,966 + -0.3 1,958,967 - +0.0 1,958,967 - -0.3 1,959,077 + +0.1 1,959,077 + -0.1 1,959,078 - -1.6 1,959,083 + -0.2 1,959,083 + -0.1 1,959,083 + +0.3 1,959,084 - -0.1 1,959,084 - -0.3 1,959,084 - -1.7 1,959,177 - +0.9 1,959,180 + +0.1 1,959,224 + -0.5 1,959,225 - -0.2 1,959,275 + +0.5 1,959,276 - +0.2 1,959,446 + +0.2 1,959,482 + +1.0 1,959,536 + +0.5 1,959,536 + -0.1 1,959,536 + -0.1 1,959,728 + +0.9
Or see this region's nucleotide sequence