Experiment: Scopoletin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23245 and PS417_23250 are separated by 2 nucleotides PS417_23250 and PS417_23255 are separated by 108 nucleotides PS417_23255 and PS417_23265 are separated by 587 nucleotides
PS417_23245: PS417_23245 - queuine tRNA-ribosyltransferase, at 5,034,337 to 5,035,461
_23245
PS417_23250: PS417_23250 - S-adenosylmethionine tRNA ribosyltransferase, at 5,035,464 to 5,036,507
_23250
PS417_23255: PS417_23255 - tRNA-Leu, at 5,036,616 to 5,036,700
_23255
PS417_23265: PS417_23265 - 5S ribosomal RNA, at 5,037,288 to 5,037,403
_23265
Position (kb)
5035
5036
5037 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5034.701 kb on - strand, within PS417_23245 at 5035.452 kb on + strand at 5035.453 kb on - strand at 5035.461 kb on + strand at 5035.461 kb on + strand at 5035.461 kb on + strand at 5035.462 kb on - strand at 5035.462 kb on - strand at 5035.462 kb on - strand at 5035.462 kb on - strand at 5035.462 kb on - strand at 5035.466 kb on - strand at 5035.558 kb on + strand at 5035.680 kb on - strand, within PS417_23250 at 5035.680 kb on - strand, within PS417_23250 at 5035.847 kb on + strand, within PS417_23250 at 5036.061 kb on + strand, within PS417_23250 at 5036.061 kb on + strand, within PS417_23250 at 5036.062 kb on - strand, within PS417_23250 at 5036.062 kb on - strand, within PS417_23250 at 5036.062 kb on - strand, within PS417_23250 at 5036.064 kb on - strand, within PS417_23250 at 5036.065 kb on + strand, within PS417_23250 at 5036.066 kb on - strand, within PS417_23250 at 5036.066 kb on - strand at 5036.066 kb on - strand, within PS417_23250 at 5036.066 kb on - strand, within PS417_23250 at 5036.081 kb on + strand, within PS417_23250 at 5036.110 kb on - strand, within PS417_23250 at 5036.522 kb on - strand at 5036.926 kb on - strand at 5037.086 kb on - strand at 5037.094 kb on + strand at 5037.094 kb on + strand at 5037.095 kb on - strand at 5037.098 kb on + strand at 5037.098 kb on + strand at 5037.099 kb on - strand at 5037.099 kb on - strand at 5037.099 kb on - strand at 5037.099 kb on - strand at 5037.099 kb on - strand at 5037.156 kb on + strand at 5037.156 kb on + strand at 5037.157 kb on - strand at 5037.208 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 2 mM; solid stress remove 5,034,701 - PS417_23245 0.32 -0.0 5,035,452 + +2.5 5,035,453 - -0.0 5,035,461 + -1.5 5,035,461 + -1.9 5,035,461 + -1.5 5,035,462 - +0.1 5,035,462 - +0.2 5,035,462 - +1.0 5,035,462 - -0.3 5,035,462 - -0.3 5,035,466 - +0.1 5,035,558 + +0.5 5,035,680 - PS417_23250 0.21 +1.2 5,035,680 - PS417_23250 0.21 -1.3 5,035,847 + PS417_23250 0.37 -0.3 5,036,061 + PS417_23250 0.57 +0.1 5,036,061 + PS417_23250 0.57 -0.6 5,036,062 - PS417_23250 0.57 -0.6 5,036,062 - PS417_23250 0.57 -0.5 5,036,062 - PS417_23250 0.57 -0.1 5,036,064 - PS417_23250 0.57 -2.3 5,036,065 + PS417_23250 0.58 +1.1 5,036,066 - PS417_23250 0.58 -0.5 5,036,066 - +1.5 5,036,066 - PS417_23250 0.58 -0.3 5,036,066 - PS417_23250 0.58 -0.9 5,036,081 + PS417_23250 0.59 -1.6 5,036,110 - PS417_23250 0.62 -0.5 5,036,522 - -0.8 5,036,926 - -0.6 5,037,086 - -0.2 5,037,094 + -0.2 5,037,094 + +0.3 5,037,095 - -1.9 5,037,098 + -0.5 5,037,098 + -0.6 5,037,099 - +0.5 5,037,099 - -0.4 5,037,099 - -0.7 5,037,099 - -0.6 5,037,099 - -0.1 5,037,156 + -0.0 5,037,156 + +0.2 5,037,157 - -0.3 5,037,208 + +1.2
Or see this region's nucleotide sequence