Experiment: Scopoletin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21280 and PS417_21285 overlap by 4 nucleotides PS417_21285 and PS417_21290 are separated by 9 nucleotides PS417_21290 and PS417_21295 are separated by 70 nucleotides
PS417_21280: PS417_21280 - membrane protein, at 4,625,721 to 4,626,536
_21280
PS417_21285: PS417_21285 - hypothetical protein, at 4,626,533 to 4,626,895
_21285
PS417_21290: PS417_21290 - ABC transporter substrate-binding protein, at 4,626,905 to 4,627,720
_21290
PS417_21295: PS417_21295 - electron transfer flavoprotein subunit beta, at 4,627,791 to 4,628,720
_21295
Position (kb)
4626
4627 Strain fitness (log2 ratio)
-2
-1
0
1 at 4625.599 kb on + strand at 4625.599 kb on + strand at 4625.600 kb on - strand at 4625.669 kb on - strand at 4625.670 kb on + strand at 4625.671 kb on - strand at 4625.709 kb on + strand at 4625.709 kb on + strand at 4625.710 kb on - strand at 4625.710 kb on - strand at 4625.833 kb on + strand, within PS417_21280 at 4625.834 kb on - strand, within PS417_21280 at 4625.880 kb on + strand, within PS417_21280 at 4625.881 kb on - strand, within PS417_21280 at 4625.881 kb on - strand, within PS417_21280 at 4625.943 kb on - strand, within PS417_21280 at 4626.272 kb on - strand, within PS417_21280 at 4626.286 kb on + strand, within PS417_21280 at 4626.292 kb on + strand at 4626.293 kb on - strand, within PS417_21280 at 4626.323 kb on - strand, within PS417_21280 at 4626.590 kb on + strand, within PS417_21285 at 4626.590 kb on + strand, within PS417_21285 at 4626.591 kb on - strand, within PS417_21285 at 4626.591 kb on - strand, within PS417_21285 at 4627.075 kb on - strand, within PS417_21290 at 4627.097 kb on + strand, within PS417_21290 at 4627.098 kb on - strand, within PS417_21290 at 4627.098 kb on - strand, within PS417_21290 at 4627.176 kb on + strand, within PS417_21290 at 4627.176 kb on + strand, within PS417_21290 at 4627.176 kb on + strand, within PS417_21290 at 4627.335 kb on + strand, within PS417_21290 at 4627.371 kb on + strand, within PS417_21290 at 4627.401 kb on + strand, within PS417_21290 at 4627.402 kb on - strand, within PS417_21290 at 4627.402 kb on - strand, within PS417_21290 at 4627.402 kb on - strand, within PS417_21290 at 4627.551 kb on - strand, within PS417_21290 at 4627.551 kb on - strand, within PS417_21290 at 4627.680 kb on - strand at 4627.773 kb on - strand at 4627.773 kb on - strand at 4627.775 kb on - strand at 4627.775 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 2 mM; solid stress remove 4,625,599 + +0.1 4,625,599 + +0.5 4,625,600 - +0.5 4,625,669 - +0.1 4,625,670 + +0.5 4,625,671 - +0.1 4,625,709 + -0.1 4,625,709 + -0.6 4,625,710 - -0.1 4,625,710 - -2.0 4,625,833 + PS417_21280 0.14 -0.8 4,625,834 - PS417_21280 0.14 -0.0 4,625,880 + PS417_21280 0.19 -0.2 4,625,881 - PS417_21280 0.20 -0.6 4,625,881 - PS417_21280 0.20 +0.1 4,625,943 - PS417_21280 0.27 -0.3 4,626,272 - PS417_21280 0.68 +1.5 4,626,286 + PS417_21280 0.69 -1.1 4,626,292 + -0.3 4,626,293 - PS417_21280 0.70 +0.8 4,626,323 - PS417_21280 0.74 -0.6 4,626,590 + PS417_21285 0.16 -1.2 4,626,590 + PS417_21285 0.16 -0.4 4,626,591 - PS417_21285 0.16 -0.5 4,626,591 - PS417_21285 0.16 -0.4 4,627,075 - PS417_21290 0.21 +0.5 4,627,097 + PS417_21290 0.24 -0.4 4,627,098 - PS417_21290 0.24 +0.1 4,627,098 - PS417_21290 0.24 -0.0 4,627,176 + PS417_21290 0.33 +0.1 4,627,176 + PS417_21290 0.33 +0.0 4,627,176 + PS417_21290 0.33 +1.0 4,627,335 + PS417_21290 0.53 +0.0 4,627,371 + PS417_21290 0.57 +0.3 4,627,401 + PS417_21290 0.61 +0.3 4,627,402 - PS417_21290 0.61 -0.2 4,627,402 - PS417_21290 0.61 +0.0 4,627,402 - PS417_21290 0.61 -0.2 4,627,551 - PS417_21290 0.79 +0.1 4,627,551 - PS417_21290 0.79 -0.9 4,627,680 - -0.0 4,627,773 - -0.1 4,627,773 - -0.4 4,627,775 - -0.4 4,627,775 - -0.4
Or see this region's nucleotide sequence