Experiment: Scopoletin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19220 and PS417_19225 are separated by 212 nucleotides PS417_19225 and PS417_19230 are separated by 134 nucleotides
PS417_19220: PS417_19220 - hypothetical protein, at 4,165,558 to 4,170,402
_19220
PS417_19225: PS417_19225 - FAD-dependent cmnm(5)s(2)U34 oxidoreductase, at 4,170,615 to 4,172,615
_19225
PS417_19230: PS417_19230 - asparagine synthase, at 4,172,750 to 4,174,522
_19230
Position (kb)
4170
4171
4172
4173 Strain fitness (log2 ratio)
-2
-1
0
1 at 4169.783 kb on + strand, within PS417_19220 at 4169.783 kb on + strand, within PS417_19220 at 4169.844 kb on - strand, within PS417_19220 at 4169.844 kb on - strand at 4170.038 kb on + strand at 4170.065 kb on + strand at 4170.135 kb on - strand at 4170.224 kb on - strand at 4170.506 kb on + strand at 4170.526 kb on + strand at 4170.690 kb on + strand at 4170.691 kb on - strand at 4170.726 kb on + strand at 4170.895 kb on + strand, within PS417_19225 at 4170.903 kb on + strand, within PS417_19225 at 4171.867 kb on + strand, within PS417_19225 at 4172.100 kb on + strand, within PS417_19225 at 4172.100 kb on + strand, within PS417_19225 at 4172.101 kb on - strand, within PS417_19225 at 4172.101 kb on - strand, within PS417_19225 at 4172.310 kb on + strand, within PS417_19225 at 4172.361 kb on + strand, within PS417_19225 at 4172.362 kb on - strand, within PS417_19225 at 4172.375 kb on + strand, within PS417_19225 at 4172.427 kb on + strand at 4172.428 kb on - strand at 4172.578 kb on + strand at 4172.645 kb on - strand at 4172.667 kb on - strand at 4172.750 kb on - strand at 4172.760 kb on + strand at 4172.985 kb on - strand, within PS417_19230 at 4172.985 kb on - strand, within PS417_19230 at 4172.985 kb on - strand, within PS417_19230 at 4173.036 kb on - strand, within PS417_19230 at 4173.192 kb on - strand, within PS417_19230 at 4173.192 kb on - strand, within PS417_19230 at 4173.260 kb on - strand, within PS417_19230 at 4173.296 kb on + strand, within PS417_19230 at 4173.296 kb on + strand, within PS417_19230 at 4173.332 kb on - strand, within PS417_19230
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 2 mM; solid stress remove 4,169,783 + PS417_19220 0.87 -0.4 4,169,783 + PS417_19220 0.87 -0.0 4,169,844 - PS417_19220 0.88 -0.1 4,169,844 - +0.8 4,170,038 + +1.6 4,170,065 + -0.6 4,170,135 - -0.5 4,170,224 - +0.4 4,170,506 + +0.1 4,170,526 + +1.2 4,170,690 + -0.0 4,170,691 - +1.0 4,170,726 + +0.0 4,170,895 + PS417_19225 0.14 -0.1 4,170,903 + PS417_19225 0.14 -0.5 4,171,867 + PS417_19225 0.63 -1.1 4,172,100 + PS417_19225 0.74 -0.1 4,172,100 + PS417_19225 0.74 -0.6 4,172,101 - PS417_19225 0.74 -0.8 4,172,101 - PS417_19225 0.74 -0.2 4,172,310 + PS417_19225 0.85 -1.1 4,172,361 + PS417_19225 0.87 -2.0 4,172,362 - PS417_19225 0.87 +0.6 4,172,375 + PS417_19225 0.88 -0.6 4,172,427 + +0.6 4,172,428 - +0.1 4,172,578 + +0.7 4,172,645 - +0.7 4,172,667 - -0.7 4,172,750 - -0.3 4,172,760 + -0.2 4,172,985 - PS417_19230 0.13 +1.2 4,172,985 - PS417_19230 0.13 +0.0 4,172,985 - PS417_19230 0.13 +0.4 4,173,036 - PS417_19230 0.16 +0.0 4,173,192 - PS417_19230 0.25 +0.2 4,173,192 - PS417_19230 0.25 +1.2 4,173,260 - PS417_19230 0.29 +0.8 4,173,296 + PS417_19230 0.31 -0.2 4,173,296 + PS417_19230 0.31 -0.9 4,173,332 - PS417_19230 0.33 -0.5
Or see this region's nucleotide sequence