Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04310 and PS417_04315 are separated by 1 nucleotides PS417_04315 and PS417_04320 are separated by 33 nucleotides PS417_04320 and PS417_04325 are separated by 88 nucleotides PS417_04325 and PS417_04330 are separated by 16 nucleotides
PS417_04310: PS417_04310 - hypothetical protein, at 966,995 to 967,423
_04310
PS417_04315: PS417_04315 - superoxide dismutase, at 967,425 to 968,036
_04315
PS417_04320: PS417_04320 - divalent cation transporter, at 968,070 to 968,963
_04320
PS417_04325: PS417_04325 - phosphocarrier protein HPr, at 969,052 to 969,324
_04325
PS417_04330: PS417_04330 - glmZ(sRNA)-inactivating NTPase, at 969,341 to 970,198
_04330
Position (kb)
968
969 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 967.073 kb on + strand, within PS417_04310 at 967.073 kb on + strand, within PS417_04310 at 967.074 kb on - strand, within PS417_04310 at 967.424 kb on + strand at 967.425 kb on - strand at 967.431 kb on + strand at 967.431 kb on + strand at 967.432 kb on - strand at 967.432 kb on - strand at 967.432 kb on - strand at 967.433 kb on + strand at 967.433 kb on + strand at 967.458 kb on + strand at 967.478 kb on + strand at 967.507 kb on - strand, within PS417_04315 at 967.507 kb on - strand, within PS417_04315 at 967.507 kb on - strand, within PS417_04315 at 967.527 kb on + strand, within PS417_04315 at 967.527 kb on + strand, within PS417_04315 at 967.935 kb on + strand, within PS417_04315 at 967.936 kb on - strand, within PS417_04315 at 967.936 kb on - strand, within PS417_04315 at 967.945 kb on - strand, within PS417_04315 at 967.966 kb on - strand, within PS417_04315 at 967.980 kb on + strand at 967.981 kb on - strand at 967.988 kb on + strand at 968.017 kb on - strand at 968.059 kb on + strand at 968.059 kb on + strand at 968.059 kb on + strand at 968.059 kb on + strand at 968.138 kb on - strand at 968.148 kb on - strand at 968.432 kb on + strand, within PS417_04320 at 968.432 kb on + strand at 968.432 kb on + strand, within PS417_04320 at 968.433 kb on - strand, within PS417_04320 at 968.454 kb on + strand, within PS417_04320 at 968.534 kb on + strand, within PS417_04320 at 968.961 kb on + strand at 968.979 kb on - strand at 968.979 kb on - strand at 969.042 kb on + strand at 969.042 kb on + strand at 969.043 kb on - strand at 969.071 kb on + strand at 969.071 kb on + strand at 969.072 kb on - strand at 969.072 kb on - strand at 969.075 kb on + strand at 969.075 kb on + strand at 969.075 kb on + strand at 969.076 kb on - strand at 969.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 967,073 + PS417_04310 0.18 -0.8 967,073 + PS417_04310 0.18 +0.1 967,074 - PS417_04310 0.18 -0.3 967,424 + -0.2 967,425 - +0.4 967,431 + +0.3 967,431 + +0.4 967,432 - -0.6 967,432 - +0.2 967,432 - +0.9 967,433 + +0.4 967,433 + -0.0 967,458 + -0.4 967,478 + +0.0 967,507 - PS417_04315 0.13 +0.4 967,507 - PS417_04315 0.13 -2.0 967,507 - PS417_04315 0.13 -0.4 967,527 + PS417_04315 0.17 -0.5 967,527 + PS417_04315 0.17 -0.7 967,935 + PS417_04315 0.83 +0.8 967,936 - PS417_04315 0.83 +0.1 967,936 - PS417_04315 0.83 -0.8 967,945 - PS417_04315 0.85 -1.1 967,966 - PS417_04315 0.88 -0.2 967,980 + -0.3 967,981 - -0.0 967,988 + +0.9 968,017 - -1.3 968,059 + +1.8 968,059 + +0.2 968,059 + -0.4 968,059 + +0.3 968,138 - -0.2 968,148 - +0.1 968,432 + PS417_04320 0.40 -0.7 968,432 + +0.8 968,432 + PS417_04320 0.40 -1.6 968,433 - PS417_04320 0.41 -0.2 968,454 + PS417_04320 0.43 -0.5 968,534 + PS417_04320 0.52 -0.4 968,961 + -0.0 968,979 - +0.9 968,979 - +0.3 969,042 + +0.5 969,042 + +0.5 969,043 - -0.1 969,071 + +0.8 969,071 + -0.1 969,072 - +0.4 969,072 - -0.8 969,075 + -0.1 969,075 + +0.9 969,075 + -0.1 969,076 - +0.1 969,346 + -0.2
Or see this region's nucleotide sequence