Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22040 and PS417_22045 are separated by 127 nucleotides PS417_22045 and PS417_22050 are separated by 3 nucleotides PS417_22050 and PS417_22055 are separated by 176 nucleotides PS417_22055 and PS417_22060 are separated by 199 nucleotides
PS417_22040: PS417_22040 - GNAT family acetyltransferase, at 4,777,199 to 4,777,639
_22040
PS417_22045: PS417_22045 - peptide deformylase, at 4,777,767 to 4,778,306
_22045
PS417_22050: PS417_22050 - ribonuclease BN, at 4,778,310 to 4,779,260
_22050
PS417_22055: PS417_22055 - hypothetical protein, at 4,779,437 to 4,779,628
_22055
PS417_22060: PS417_22060 - hypothetical protein, at 4,779,828 to 4,780,205
_22060
Position (kb) 4778
4779
4780 Strain fitness (log2 ratio) -2
-1
0
1 at 4777.499 kb on + strand, within PS417_22040 at 4777.499 kb on + strand, within PS417_22040 at 4777.500 kb on - strand, within PS417_22040 at 4777.500 kb on - strand at 4777.565 kb on + strand, within PS417_22040 at 4777.565 kb on + strand, within PS417_22040 at 4777.849 kb on + strand, within PS417_22045 at 4777.850 kb on - strand, within PS417_22045 at 4778.530 kb on + strand, within PS417_22050 at 4778.530 kb on + strand, within PS417_22050 at 4778.530 kb on + strand, within PS417_22050 at 4778.531 kb on - strand, within PS417_22050 at 4778.531 kb on - strand, within PS417_22050 at 4778.531 kb on - strand, within PS417_22050 at 4778.531 kb on - strand, within PS417_22050 at 4778.563 kb on + strand, within PS417_22050 at 4778.564 kb on - strand, within PS417_22050 at 4778.564 kb on - strand, within PS417_22050 at 4778.662 kb on + strand, within PS417_22050 at 4778.662 kb on + strand, within PS417_22050 at 4778.666 kb on - strand, within PS417_22050 at 4779.172 kb on + strand at 4779.173 kb on - strand at 4779.261 kb on - strand at 4779.333 kb on + strand at 4779.334 kb on - strand at 4779.334 kb on - strand at 4779.365 kb on + strand at 4779.631 kb on + strand at 4779.631 kb on + strand at 4779.667 kb on - strand at 4779.827 kb on + strand at 4779.981 kb on + strand, within PS417_22060 at 4780.089 kb on - strand, within PS417_22060
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 4,777,499 + PS417_22040 0.68 -1.0 4,777,499 + PS417_22040 0.68 +0.7 4,777,500 - PS417_22040 0.68 -0.6 4,777,500 - -0.4 4,777,565 + PS417_22040 0.83 -1.1 4,777,565 + PS417_22040 0.83 -0.0 4,777,849 + PS417_22045 0.15 -0.0 4,777,850 - PS417_22045 0.15 -0.1 4,778,530 + PS417_22050 0.23 +0.3 4,778,530 + PS417_22050 0.23 -0.2 4,778,530 + PS417_22050 0.23 +0.6 4,778,531 - PS417_22050 0.23 -1.8 4,778,531 - PS417_22050 0.23 +0.4 4,778,531 - PS417_22050 0.23 -0.4 4,778,531 - PS417_22050 0.23 -0.2 4,778,563 + PS417_22050 0.27 -0.3 4,778,564 - PS417_22050 0.27 -1.6 4,778,564 - PS417_22050 0.27 -0.1 4,778,662 + PS417_22050 0.37 +1.0 4,778,662 + PS417_22050 0.37 +0.3 4,778,666 - PS417_22050 0.37 +0.3 4,779,172 + -0.4 4,779,173 - -0.9 4,779,261 - +0.0 4,779,333 + -1.4 4,779,334 - +0.3 4,779,334 - +0.4 4,779,365 + -0.4 4,779,631 + -0.4 4,779,631 + +0.3 4,779,667 - +0.3 4,779,827 + +0.0 4,779,981 + PS417_22060 0.40 -0.3 4,780,089 - PS417_22060 0.69 -0.6
Or see this region's nucleotide sequence