Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17435 and PS417_17440 are separated by 126 nucleotides PS417_17440 and PS417_17445 are separated by 16 nucleotides PS417_17445 and PS417_17450 are separated by 9 nucleotides
PS417_17435: PS417_17435 - dehydrogenase, at 3,808,900 to 3,810,675
_17435
PS417_17440: PS417_17440 - beta-lactamase, at 3,810,802 to 3,811,734
_17440
PS417_17445: PS417_17445 - sulfur oxidation protein SoxZ, at 3,811,751 to 3,812,500
_17445
PS417_17450: PS417_17450 - amino acid ABC transporter substrate-binding protein, at 3,812,510 to 3,813,385
_17450
Position (kb)
3810
3811
3812 Strain fitness (log2 ratio)
-1
0
1 at 3809.873 kb on + strand, within PS417_17435 at 3809.874 kb on - strand, within PS417_17435 at 3809.874 kb on - strand, within PS417_17435 at 3809.876 kb on + strand at 3809.984 kb on + strand, within PS417_17435 at 3809.984 kb on + strand at 3809.985 kb on - strand, within PS417_17435 at 3809.991 kb on - strand at 3810.050 kb on + strand, within PS417_17435 at 3810.050 kb on + strand at 3810.050 kb on + strand, within PS417_17435 at 3810.051 kb on - strand, within PS417_17435 at 3810.383 kb on + strand, within PS417_17435 at 3810.383 kb on + strand, within PS417_17435 at 3810.383 kb on + strand, within PS417_17435 at 3810.785 kb on - strand at 3810.785 kb on - strand at 3810.995 kb on + strand, within PS417_17440 at 3810.996 kb on - strand, within PS417_17440 at 3811.715 kb on - strand at 3811.721 kb on - strand at 3811.921 kb on + strand, within PS417_17445 at 3811.983 kb on - strand, within PS417_17445 at 3811.983 kb on - strand, within PS417_17445 at 3811.983 kb on - strand, within PS417_17445 at 3812.511 kb on + strand at 3812.511 kb on + strand at 3812.512 kb on - strand at 3812.517 kb on + strand at 3812.517 kb on + strand at 3812.517 kb on + strand at 3812.518 kb on - strand at 3812.518 kb on - strand at 3812.536 kb on - strand at 3812.536 kb on - strand at 3812.536 kb on - strand at 3812.556 kb on + strand at 3812.556 kb on + strand at 3812.557 kb on - strand at 3812.557 kb on - strand at 3812.557 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 3,809,873 + PS417_17435 0.55 +0.3 3,809,874 - PS417_17435 0.55 -0.4 3,809,874 - PS417_17435 0.55 -0.2 3,809,876 + -0.6 3,809,984 + PS417_17435 0.61 -0.4 3,809,984 + -0.2 3,809,985 - PS417_17435 0.61 -0.3 3,809,991 - +0.6 3,810,050 + PS417_17435 0.65 -0.9 3,810,050 + +1.4 3,810,050 + PS417_17435 0.65 +0.3 3,810,051 - PS417_17435 0.65 +0.1 3,810,383 + PS417_17435 0.84 -0.1 3,810,383 + PS417_17435 0.84 -0.1 3,810,383 + PS417_17435 0.84 +0.2 3,810,785 - -0.1 3,810,785 - -0.8 3,810,995 + PS417_17440 0.21 -0.7 3,810,996 - PS417_17440 0.21 -0.6 3,811,715 - +0.1 3,811,721 - -0.8 3,811,921 + PS417_17445 0.23 +0.4 3,811,983 - PS417_17445 0.31 -0.4 3,811,983 - PS417_17445 0.31 -0.5 3,811,983 - PS417_17445 0.31 +0.5 3,812,511 + +0.5 3,812,511 + -0.1 3,812,512 - -0.4 3,812,517 + -0.7 3,812,517 + -0.0 3,812,517 + +0.5 3,812,518 - -1.2 3,812,518 - +0.6 3,812,536 - +0.2 3,812,536 - -0.4 3,812,536 - +0.6 3,812,556 + -0.3 3,812,556 + +0.4 3,812,557 - -0.4 3,812,557 - +0.5 3,812,557 - -0.4
Or see this region's nucleotide sequence