Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12580 and PS417_12585 are separated by 151 nucleotides PS417_12585 and PS417_12590 are separated by 6 nucleotides
PS417_12580: PS417_12580 - membrane protein, at 2,737,141 to 2,737,782
_12580
PS417_12585: PS417_12585 - acriflavine resistance protein B, at 2,737,934 to 2,741,026
_12585
PS417_12590: PS417_12590 - RND transporter, at 2,741,033 to 2,742,175
_12590
Position (kb)
2737
2738
2739
2740
2741
2742 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2737.085 kb on + strand at 2737.085 kb on + strand at 2737.086 kb on - strand at 2737.086 kb on - strand at 2737.124 kb on - strand at 2737.165 kb on - strand at 2737.327 kb on - strand, within PS417_12580 at 2737.377 kb on - strand, within PS417_12580 at 2737.377 kb on - strand, within PS417_12580 at 2737.377 kb on - strand, within PS417_12580 at 2737.380 kb on - strand, within PS417_12580 at 2737.392 kb on - strand, within PS417_12580 at 2737.600 kb on + strand, within PS417_12580 at 2737.649 kb on + strand, within PS417_12580 at 2737.650 kb on - strand, within PS417_12580 at 2737.650 kb on - strand, within PS417_12580 at 2737.802 kb on + strand at 2737.803 kb on - strand at 2737.866 kb on - strand at 2738.036 kb on - strand at 2738.325 kb on - strand, within PS417_12585 at 2739.322 kb on - strand, within PS417_12585 at 2739.399 kb on + strand, within PS417_12585 at 2739.400 kb on - strand, within PS417_12585 at 2739.454 kb on - strand, within PS417_12585 at 2739.454 kb on - strand, within PS417_12585 at 2739.631 kb on - strand, within PS417_12585 at 2739.937 kb on + strand, within PS417_12585 at 2739.937 kb on + strand at 2739.937 kb on + strand, within PS417_12585 at 2740.004 kb on - strand, within PS417_12585 at 2740.005 kb on + strand, within PS417_12585 at 2740.005 kb on + strand, within PS417_12585 at 2740.005 kb on + strand, within PS417_12585 at 2740.005 kb on + strand, within PS417_12585 at 2740.006 kb on - strand, within PS417_12585 at 2740.006 kb on - strand, within PS417_12585 at 2740.006 kb on - strand, within PS417_12585 at 2740.063 kb on - strand, within PS417_12585 at 2740.158 kb on - strand, within PS417_12585 at 2740.206 kb on + strand, within PS417_12585 at 2740.497 kb on + strand, within PS417_12585 at 2740.798 kb on - strand at 2740.882 kb on - strand at 2740.884 kb on - strand at 2740.890 kb on + strand at 2741.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 2,737,085 + +0.0 2,737,085 + +1.8 2,737,086 - -0.5 2,737,086 - +1.8 2,737,124 - -1.8 2,737,165 - -1.6 2,737,327 - PS417_12580 0.29 -0.6 2,737,377 - PS417_12580 0.37 -0.0 2,737,377 - PS417_12580 0.37 +0.2 2,737,377 - PS417_12580 0.37 +0.0 2,737,380 - PS417_12580 0.37 -0.0 2,737,392 - PS417_12580 0.39 +0.3 2,737,600 + PS417_12580 0.71 +0.2 2,737,649 + PS417_12580 0.79 -0.1 2,737,650 - PS417_12580 0.79 +0.7 2,737,650 - PS417_12580 0.79 +0.2 2,737,802 + +0.8 2,737,803 - -0.1 2,737,866 - -1.4 2,738,036 - -0.3 2,738,325 - PS417_12585 0.13 -1.0 2,739,322 - PS417_12585 0.45 -0.9 2,739,399 + PS417_12585 0.47 +0.1 2,739,400 - PS417_12585 0.47 +0.5 2,739,454 - PS417_12585 0.49 -1.1 2,739,454 - PS417_12585 0.49 -1.5 2,739,631 - PS417_12585 0.55 +0.3 2,739,937 + PS417_12585 0.65 -0.0 2,739,937 + +0.1 2,739,937 + PS417_12585 0.65 -0.4 2,740,004 - PS417_12585 0.67 -0.9 2,740,005 + PS417_12585 0.67 -0.3 2,740,005 + PS417_12585 0.67 -1.4 2,740,005 + PS417_12585 0.67 -0.3 2,740,005 + PS417_12585 0.67 -0.7 2,740,006 - PS417_12585 0.67 +0.6 2,740,006 - PS417_12585 0.67 -2.0 2,740,006 - PS417_12585 0.67 -0.4 2,740,063 - PS417_12585 0.69 -0.7 2,740,158 - PS417_12585 0.72 -1.9 2,740,206 + PS417_12585 0.73 +0.6 2,740,497 + PS417_12585 0.83 -0.6 2,740,798 - -0.4 2,740,882 - -1.0 2,740,884 - +0.2 2,740,890 + +0.1 2,741,012 - -0.6
Or see this region's nucleotide sequence