Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06530 and PS417_06535 are separated by 27 nucleotides PS417_06535 and PS417_06540 are separated by 269 nucleotides PS417_06540 and PS417_06545 are separated by 725 nucleotides
PS417_06530: PS417_06530 - membrane protein, at 1,447,205 to 1,448,347
_06530
PS417_06535: PS417_06535 - pyridoxine 5'-phosphate oxidase, at 1,448,375 to 1,449,022
_06535
PS417_06540: PS417_06540 - membrane protein, at 1,449,292 to 1,449,756
_06540
PS417_06545: PS417_06545 - pH-dependent sodium/proton antiporter, at 1,450,482 to 1,451,675
_06545
Position (kb)
1449
1450 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1448.366 kb on + strand at 1449.096 kb on + strand at 1449.096 kb on + strand at 1449.132 kb on - strand at 1449.143 kb on - strand at 1449.143 kb on - strand at 1449.155 kb on + strand at 1449.155 kb on + strand at 1449.156 kb on - strand at 1449.156 kb on - strand at 1449.197 kb on - strand at 1449.197 kb on - strand at 1449.199 kb on + strand at 1449.199 kb on + strand at 1449.261 kb on + strand at 1449.291 kb on + strand at 1449.292 kb on - strand at 1449.292 kb on - strand at 1449.298 kb on - strand at 1449.298 kb on - strand at 1449.298 kb on - strand at 1449.298 kb on - strand at 1449.309 kb on - strand at 1449.309 kb on - strand at 1449.459 kb on + strand, within PS417_06540 at 1449.459 kb on + strand, within PS417_06540 at 1449.623 kb on + strand, within PS417_06540 at 1449.735 kb on + strand at 1449.735 kb on + strand at 1449.736 kb on - strand at 1449.736 kb on - strand at 1449.736 kb on - strand at 1449.736 kb on - strand at 1449.738 kb on + strand at 1449.739 kb on - strand at 1449.773 kb on + strand at 1449.814 kb on + strand at 1449.815 kb on - strand at 1449.868 kb on + strand at 1449.869 kb on - strand at 1449.947 kb on - strand at 1449.950 kb on - strand at 1449.950 kb on - strand at 1450.045 kb on + strand at 1450.073 kb on - strand at 1450.128 kb on - strand at 1450.140 kb on - strand at 1450.193 kb on + strand at 1450.194 kb on - strand at 1450.194 kb on - strand at 1450.296 kb on + strand at 1450.297 kb on - strand at 1450.297 kb on - strand at 1450.322 kb on + strand at 1450.322 kb on + strand at 1450.343 kb on + strand at 1450.344 kb on - strand at 1450.357 kb on + strand at 1450.377 kb on + strand at 1450.390 kb on + strand at 1450.391 kb on - strand at 1450.450 kb on - strand at 1450.450 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 1,448,366 + -1.1 1,449,096 + -2.2 1,449,096 + -1.0 1,449,132 - +0.4 1,449,143 - +1.8 1,449,143 - -0.2 1,449,155 + -0.6 1,449,155 + -0.2 1,449,156 - +0.5 1,449,156 - -0.3 1,449,197 - -0.4 1,449,197 - -0.0 1,449,199 + +0.3 1,449,199 + +0.3 1,449,261 + -0.3 1,449,291 + +0.5 1,449,292 - -0.2 1,449,292 - -0.7 1,449,298 - -1.2 1,449,298 - -0.3 1,449,298 - +0.2 1,449,298 - +0.2 1,449,309 - -0.0 1,449,309 - +0.3 1,449,459 + PS417_06540 0.36 +0.0 1,449,459 + PS417_06540 0.36 -1.1 1,449,623 + PS417_06540 0.71 -1.3 1,449,735 + +0.8 1,449,735 + -0.4 1,449,736 - -0.5 1,449,736 - +0.7 1,449,736 - +1.0 1,449,736 - +0.6 1,449,738 + -2.1 1,449,739 - +0.3 1,449,773 + +1.4 1,449,814 + +0.0 1,449,815 - -0.4 1,449,868 + +0.6 1,449,869 - +0.1 1,449,947 - -0.8 1,449,950 - -0.0 1,449,950 - +0.3 1,450,045 + +1.0 1,450,073 - -0.4 1,450,128 - +0.2 1,450,140 - +0.8 1,450,193 + +0.1 1,450,194 - -0.3 1,450,194 - -2.1 1,450,296 + -0.5 1,450,297 - +0.2 1,450,297 - -0.1 1,450,322 + -0.3 1,450,322 + +0.2 1,450,343 + -0.2 1,450,344 - -1.2 1,450,357 + -1.0 1,450,377 + +0.5 1,450,390 + +0.6 1,450,391 - +0.4 1,450,450 - -0.5 1,450,450 - +0.5
Or see this region's nucleotide sequence