Experiment: Scopoletin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_05095 and PS417_05100 overlap by 4 nucleotides PS417_05100 and PS417_05105 are separated by 170 nucleotides PS417_05105 and PS417_05110 overlap by 4 nucleotides
PS417_05095: PS417_05095 - membrane protein, at 1,133,013 to 1,133,954
_05095
PS417_05100: PS417_05100 - RNA polymerase sigma factor, at 1,133,951 to 1,134,439
_05100
PS417_05105: PS417_05105 - membrane protein, at 1,134,610 to 1,134,912
_05105
PS417_05110: PS417_05110 - peptidase, at 1,134,909 to 1,136,483
_05110
Position (kb) 1134
1135 Strain fitness (log2 ratio) -1
0
1
2 at 1133.657 kb on + strand, within PS417_05095 at 1133.658 kb on - strand at 1133.658 kb on - strand, within PS417_05095 at 1133.658 kb on - strand, within PS417_05095 at 1133.954 kb on + strand at 1134.016 kb on + strand, within PS417_05100 at 1134.016 kb on + strand, within PS417_05100 at 1134.202 kb on - strand, within PS417_05100 at 1134.408 kb on + strand at 1134.408 kb on + strand at 1134.408 kb on + strand at 1134.409 kb on - strand at 1134.471 kb on - strand at 1134.641 kb on - strand, within PS417_05105 at 1134.787 kb on + strand, within PS417_05105 at 1134.787 kb on + strand, within PS417_05105 at 1134.788 kb on - strand, within PS417_05105 at 1134.788 kb on - strand, within PS417_05105 at 1135.011 kb on + strand at 1135.012 kb on - strand at 1135.101 kb on + strand, within PS417_05110 at 1135.101 kb on + strand, within PS417_05110 at 1135.102 kb on - strand, within PS417_05110 at 1135.294 kb on - strand, within PS417_05110 at 1135.511 kb on + strand, within PS417_05110 at 1135.511 kb on + strand, within PS417_05110 at 1135.511 kb on + strand, within PS417_05110 at 1135.511 kb on + strand, within PS417_05110 at 1135.512 kb on - strand, within PS417_05110 at 1135.512 kb on - strand, within PS417_05110 at 1135.515 kb on + strand, within PS417_05110 at 1135.515 kb on + strand, within PS417_05110 at 1135.515 kb on + strand, within PS417_05110 at 1135.516 kb on - strand, within PS417_05110 at 1135.572 kb on + strand, within PS417_05110 at 1135.572 kb on + strand, within PS417_05110 at 1135.616 kb on + strand, within PS417_05110 at 1135.617 kb on - strand, within PS417_05110 at 1135.674 kb on + strand, within PS417_05110 at 1135.675 kb on - strand, within PS417_05110 at 1135.675 kb on - strand, within PS417_05110 at 1135.675 kb on - strand, within PS417_05110 at 1135.890 kb on + strand, within PS417_05110 at 1135.891 kb on - strand, within PS417_05110
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 0.5 mM; solid stress remove 1,133,657 + PS417_05095 0.68 +1.1 1,133,658 - +0.5 1,133,658 - PS417_05095 0.68 -0.4 1,133,658 - PS417_05095 0.68 -0.1 1,133,954 + +0.2 1,134,016 + PS417_05100 0.13 -0.6 1,134,016 + PS417_05100 0.13 -0.5 1,134,202 - PS417_05100 0.51 -0.4 1,134,408 + +0.1 1,134,408 + -0.8 1,134,408 + -0.9 1,134,409 - +0.1 1,134,471 - -0.1 1,134,641 - PS417_05105 0.10 -0.7 1,134,787 + PS417_05105 0.58 -1.6 1,134,787 + PS417_05105 0.58 -0.0 1,134,788 - PS417_05105 0.59 -1.0 1,134,788 - PS417_05105 0.59 -0.9 1,135,011 + -0.5 1,135,012 - -0.5 1,135,101 + PS417_05110 0.12 -0.2 1,135,101 + PS417_05110 0.12 -0.0 1,135,102 - PS417_05110 0.12 +0.8 1,135,294 - PS417_05110 0.24 +0.1 1,135,511 + PS417_05110 0.38 -0.1 1,135,511 + PS417_05110 0.38 -0.3 1,135,511 + PS417_05110 0.38 +0.1 1,135,511 + PS417_05110 0.38 -0.4 1,135,512 - PS417_05110 0.38 +0.1 1,135,512 - PS417_05110 0.38 +2.3 1,135,515 + PS417_05110 0.38 +0.3 1,135,515 + PS417_05110 0.38 -0.1 1,135,515 + PS417_05110 0.38 -0.2 1,135,516 - PS417_05110 0.39 +0.2 1,135,572 + PS417_05110 0.42 +0.5 1,135,572 + PS417_05110 0.42 +0.7 1,135,616 + PS417_05110 0.45 -0.3 1,135,617 - PS417_05110 0.45 -0.1 1,135,674 + PS417_05110 0.49 -0.1 1,135,675 - PS417_05110 0.49 -1.4 1,135,675 - PS417_05110 0.49 +1.7 1,135,675 - PS417_05110 0.49 -0.7 1,135,890 + PS417_05110 0.62 -0.6 1,135,891 - PS417_05110 0.62 -0.8
Or see this region's nucleotide sequence